Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 TCF3P1-201ENST00000423021 1937 ntBASIC14.84□□□□□ -0.03
LINC01006Q8NI28 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 AL691432.3-201ENST00000621860 400 ntBASIC14.84□□□□□ -0.03
LINC01006Q8NI28 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LINC01006Q8NI28 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.83□□□□□ -0.03
LINC01006Q8NI28 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.83□□□□□ -0.03
LINC01006Q8NI28 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC01006Q8NI28 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC01006Q8NI28 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.83□□□□□ -0.03
LINC01006Q8NI28 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
LINC01006Q8NI28 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 AC036111.1-201ENST00000533973 1582 ntBASIC14.83□□□□□ -0.04
LINC01006Q8NI28 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 AL023284.2-201ENST00000405850 579 ntBASIC14.83□□□□□ -0.04
LINC01006Q8NI28 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 NPAP1P7-201ENST00000613027 823 ntBASIC14.83□□□□□ -0.04
LINC01006Q8NI28 AC012313.10-201ENST00000623509 926 ntBASIC14.83□□□□□ -0.04
LINC01006Q8NI28 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01006Q8NI28 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.82□□□□□ -0.04
LINC01006Q8NI28 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 MCCD1P1-208ENST00000445732 328 ntBASIC14.82□□□□□ -0.04
LINC01006Q8NI28 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 MIR3180-5-201ENST00000583743 153 ntBASIC14.82□□□□□ -0.04
LINC01006Q8NI28 AC092119.3-201ENST00000612618 583 ntBASIC14.82□□□□□ -0.04
LINC01006Q8NI28 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.82□□□□□ -0.04
LINC01006Q8NI28 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01006Q8NI28 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01006Q8NI28 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms