Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 ST20-AS1-201ENST00000560255 4223 ntBASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 AC068880.1-201ENST00000507289 2297 ntBASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 AC079089.2-201ENST00000531211 1277 ntBASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 AL034346.1-201ENST00000568244 1277 ntBASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC10.48□□□□□ -0.73
SPTSSBQ8NFR3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 LINC00554-201ENST00000564841 3011 ntBASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 TET3-201ENST00000305799 5174 ntTSL 5 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 AC121338.2-201ENST00000622535 1744 ntBASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 FST-202ENST00000396947 2538 ntTSL 5 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 AC135776.1-201ENST00000319817 2481 ntBASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SPTSSBQ8NFR3 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms