Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT4Q8N9R6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.74■□□□□ 0.43
CDRT4Q8N9R6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT4Q8N9R6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT4Q8N9R6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.74■□□□□ 0.43
CDRT4Q8N9R6 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.74■□□□□ 0.43
CDRT4Q8N9R6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT4Q8N9R6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT4Q8N9R6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT4Q8N9R6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CDRT4Q8N9R6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT4Q8N9R6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT4Q8N9R6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT4Q8N9R6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT4Q8N9R6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.74■□□□□ 0.43
CDRT4Q8N9R6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 AC004951.3-201ENST00000418645 1148 ntBASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 RCC2P6-201ENST00000526625 1557 ntBASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT4Q8N9R6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 PRSS44-201ENST00000515154 1146 ntBASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 AP001412.1-201ENST00000608405 714 ntBASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.72■□□□□ 0.43
CDRT4Q8N9R6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 AC006333.2-201ENST00000607957 2099 ntBASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT4Q8N9R6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDRT4Q8N9R6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDRT4Q8N9R6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.7■□□□□ 0.42
CDRT4Q8N9R6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.7■□□□□ 0.42
CDRT4Q8N9R6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDRT4Q8N9R6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CDRT4Q8N9R6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDRT4Q8N9R6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDRT4Q8N9R6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms