Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.61■□□□□ 0.73
PAF1Q8N7H5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 KSR1P1-201ENST00000446298 240 ntBASIC19.61■□□□□ 0.73
PAF1Q8N7H5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 AC131212.4-201ENST00000623606 975 ntBASIC19.61■□□□□ 0.73
PAF1Q8N7H5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PAF1Q8N7H5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 TSPY7P-201ENST00000431358 1114 ntBASIC19.6■□□□□ 0.73
PAF1Q8N7H5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.6■□□□□ 0.73
PAF1Q8N7H5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAF1Q8N7H5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 KRT17P2-201ENST00000300992 1314 ntBASIC19.59■□□□□ 0.73
PAF1Q8N7H5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 MIR4785-201ENST00000585005 73 ntBASIC19.59■□□□□ 0.73
PAF1Q8N7H5 AC113410.3-201ENST00000623366 203 ntBASIC19.59■□□□□ 0.73
PAF1Q8N7H5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PAF1Q8N7H5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PAF1Q8N7H5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.58■□□□□ 0.73
PAF1Q8N7H5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.58■□□□□ 0.72
PAF1Q8N7H5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PAF1Q8N7H5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.57■□□□□ 0.72
PAF1Q8N7H5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PAF1Q8N7H5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
PAF1Q8N7H5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PAF1Q8N7H5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PAF1Q8N7H5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms