Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMC5Q8IY18 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.64■■□□□ 1.37
SMC5Q8IY18 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.64■■□□□ 1.37
SMC5Q8IY18 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
SMC5Q8IY18 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.64■■□□□ 1.37
SMC5Q8IY18 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMC5Q8IY18 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.64■■□□□ 1.37
SMC5Q8IY18 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SMC5Q8IY18 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
SMC5Q8IY18 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMC5Q8IY18 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SMC5Q8IY18 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SMC5Q8IY18 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC23.64■■□□□ 1.37
SMC5Q8IY18 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
SMC5Q8IY18 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC23.63■■□□□ 1.37
SMC5Q8IY18 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.63■■□□□ 1.37
SMC5Q8IY18 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.63■■□□□ 1.37
SMC5Q8IY18 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMC5Q8IY18 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SMC5Q8IY18 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.63■■□□□ 1.37
SMC5Q8IY18 CD99P1-205ENST00000527459 561 ntBASIC23.63■■□□□ 1.37
SMC5Q8IY18 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.63■■□□□ 1.37
SMC5Q8IY18 ANO7L1-203ENST00000602586 1720 ntBASIC23.63■■□□□ 1.37
SMC5Q8IY18 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.63■■□□□ 1.37
SMC5Q8IY18 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMC5Q8IY18 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMC5Q8IY18 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMC5Q8IY18 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
SMC5Q8IY18 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.62■■□□□ 1.37
SMC5Q8IY18 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMC5Q8IY18 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMC5Q8IY18 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
SMC5Q8IY18 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMC5Q8IY18 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMC5Q8IY18 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
SMC5Q8IY18 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.62■■□□□ 1.37
SMC5Q8IY18 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SMC5Q8IY18 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.62■■□□□ 1.37
SMC5Q8IY18 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SMC5Q8IY18 RPS2P4-201ENST00000476944 856 ntBASIC23.62■■□□□ 1.37
SMC5Q8IY18 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.62■■□□□ 1.37
SMC5Q8IY18 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.62■■□□□ 1.37
SMC5Q8IY18 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC23.62■■□□□ 1.37
SMC5Q8IY18 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMC5Q8IY18 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SMC5Q8IY18 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMC5Q8IY18 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SMC5Q8IY18 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMC5Q8IY18 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMC5Q8IY18 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SMC5Q8IY18 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMC5Q8IY18 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMC5Q8IY18 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SMC5Q8IY18 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMC5Q8IY18 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMC5Q8IY18 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.61■■□□□ 1.37
SMC5Q8IY18 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.61■■□□□ 1.37
SMC5Q8IY18 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.61■■□□□ 1.37
SMC5Q8IY18 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMC5Q8IY18 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMC5Q8IY18 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
SMC5Q8IY18 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMC5Q8IY18 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.61■■□□□ 1.37
SMC5Q8IY18 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.61■■□□□ 1.37
SMC5Q8IY18 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.61■■□□□ 1.37
SMC5Q8IY18 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC23.6■■□□□ 1.37
SMC5Q8IY18 HTR7P1-201ENST00000538670 1336 ntBASIC23.6■■□□□ 1.37
SMC5Q8IY18 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.6■■□□□ 1.37
SMC5Q8IY18 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMC5Q8IY18 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMC5Q8IY18 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMC5Q8IY18 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMC5Q8IY18 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMC5Q8IY18 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC23.6■■□□□ 1.37
SMC5Q8IY18 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMC5Q8IY18 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMC5Q8IY18 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.6■■□□□ 1.37
SMC5Q8IY18 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.6■■□□□ 1.37
SMC5Q8IY18 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.6■■□□□ 1.37
SMC5Q8IY18 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC23.6■■□□□ 1.37
SMC5Q8IY18 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMC5Q8IY18 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC23.6■■□□□ 1.37
SMC5Q8IY18 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC23.6■■□□□ 1.37
SMC5Q8IY18 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMC5Q8IY18 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC23.6■■□□□ 1.37
SMC5Q8IY18 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMC5Q8IY18 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SMC5Q8IY18 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
SMC5Q8IY18 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMC5Q8IY18 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMC5Q8IY18 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMC5Q8IY18 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMC5Q8IY18 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
SMC5Q8IY18 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMC5Q8IY18 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMC5Q8IY18 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMC5Q8IY18 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.59■■□□□ 1.37
SMC5Q8IY18 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.59■■□□□ 1.37
SMC5Q8IY18 AC131212.4-201ENST00000623606 975 ntBASIC23.59■■□□□ 1.37
SMC5Q8IY18 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms