Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRTM1Q86UE6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 AP006587.1-201ENST00000534129 1502 ntBASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 RPS2P52-201ENST00000469610 820 ntBASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 AC133552.2-202ENST00000575694 574 ntBASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRTM1Q86UE6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 AC006557.6-201ENST00000623071 864 ntBASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 ABALON-201ENST00000629058 1903 ntBASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LRRTM1Q86UE6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms