Protein–RNA interactions for Protein: Q6UXM1

LRIG3, Leucine-rich repeats and immunoglobulin-like domains protein 3, humanhuman

Predictions only

Length 1,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3Q6UXM1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 CYP2T3P-201ENST00000601990 817 ntBASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
LRIG3Q6UXM1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 GNAS-203ENST00000306120 1878 ntBASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 AIRN-201ENST00000601203 4374 ntBASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRIG3Q6UXM1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIG3Q6UXM1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 SIRPAP1-201ENST00000448467 1770 ntBASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRIG3Q6UXM1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms