Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 FAM207BP-201ENST00000447172 505 ntBASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 LINC01023-201ENST00000606054 436 ntBASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 AP000692.2-201ENST00000608391 879 ntBASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFWD3Q6PCD5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 DGCR10-201ENST00000609839 495 ntBASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 NEFHP1-201ENST00000412845 2629 ntBASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFWD3Q6PCD5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 SDHAP1-207ENST00000440850 2000 ntBASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RFWD3Q6PCD5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 AC012306.2-201ENST00000609350 630 ntBASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 AC010947.1-201ENST00000623454 693 ntBASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RFWD3Q6PCD5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 NAPSB-206ENST00000562112 1266 ntBASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 AC097493.4-201ENST00000641197 219 ntBASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 LETM1P2-201ENST00000597330 2178 ntBASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RFWD3Q6PCD5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms