Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM53Q6P2H8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 AC135050.7-201ENST00000624508 2218 ntBASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 RNA5SP413-201ENST00000516373 109 ntBASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TMEM53Q6P2H8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 KRT18P6-201ENST00000555540 1265 ntBASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 AC006557.6-201ENST00000623071 864 ntBASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM53Q6P2H8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms