Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.11■■□□□ 1.13
KRT40Q6A162 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
KRT40Q6A162 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KRT40Q6A162 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
KRT40Q6A162 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
KRT40Q6A162 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.1■■□□□ 1.13
KRT40Q6A162 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.1■■□□□ 1.13
KRT40Q6A162 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KRT40Q6A162 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.1■■□□□ 1.13
KRT40Q6A162 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
KRT40Q6A162 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC22.1■■□□□ 1.13
KRT40Q6A162 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
KRT40Q6A162 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
KRT40Q6A162 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
KRT40Q6A162 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
KRT40Q6A162 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
KRT40Q6A162 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.1■■□□□ 1.13
KRT40Q6A162 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.1■■□□□ 1.13
KRT40Q6A162 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
KRT40Q6A162 AL353708.3-201ENST00000610272 989 ntBASIC22.1■■□□□ 1.13
KRT40Q6A162 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.1■■□□□ 1.13
KRT40Q6A162 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.1■■□□□ 1.13
KRT40Q6A162 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KRT40Q6A162 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.1■■□□□ 1.13
KRT40Q6A162 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KRT40Q6A162 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
KRT40Q6A162 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KRT40Q6A162 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
KRT40Q6A162 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
KRT40Q6A162 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.09■■□□□ 1.13
KRT40Q6A162 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT40Q6A162 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KRT40Q6A162 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT40Q6A162 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
KRT40Q6A162 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.09■■□□□ 1.13
KRT40Q6A162 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KRT40Q6A162 TSPY23P-201ENST00000440136 739 ntBASIC22.09■■□□□ 1.13
KRT40Q6A162 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.09■■□□□ 1.13
KRT40Q6A162 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT40Q6A162 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.09■■□□□ 1.13
KRT40Q6A162 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT40Q6A162 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.09■■□□□ 1.13
KRT40Q6A162 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT40Q6A162 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT40Q6A162 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT40Q6A162 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
KRT40Q6A162 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
KRT40Q6A162 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT40Q6A162 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
KRT40Q6A162 AC093503.3-201ENST00000624917 2352 ntBASIC22.09■■□□□ 1.13
KRT40Q6A162 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRT40Q6A162 FEM1AP3-201ENST00000403722 1741 ntBASIC22.09■■□□□ 1.13
KRT40Q6A162 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.08■■□□□ 1.13
KRT40Q6A162 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
KRT40Q6A162 AC006333.2-201ENST00000607957 2099 ntBASIC22.08■■□□□ 1.13
KRT40Q6A162 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT40Q6A162 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.08■■□□□ 1.13
KRT40Q6A162 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
KRT40Q6A162 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT40Q6A162 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
KRT40Q6A162 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT40Q6A162 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT40Q6A162 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
KRT40Q6A162 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.08■■□□□ 1.13
KRT40Q6A162 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT40Q6A162 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT40Q6A162 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT40Q6A162 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
KRT40Q6A162 AC004980.1-204ENST00000429707 299 ntBASIC22.08■■□□□ 1.13
KRT40Q6A162 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.08■■□□□ 1.13
KRT40Q6A162 AP002982.1-201ENST00000492365 877 ntBASIC22.08■■□□□ 1.13
KRT40Q6A162 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.08■■□□□ 1.13
KRT40Q6A162 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.08■■□□□ 1.13
KRT40Q6A162 CD177P1-201ENST00000606252 935 ntBASIC22.08■■□□□ 1.13
KRT40Q6A162 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.08■■□□□ 1.13
KRT40Q6A162 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
KRT40Q6A162 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.08■■□□□ 1.12
KRT40Q6A162 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
KRT40Q6A162 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.08■■□□□ 1.12
KRT40Q6A162 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KRT40Q6A162 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.07■■□□□ 1.12
KRT40Q6A162 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KRT40Q6A162 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KRT40Q6A162 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
KRT40Q6A162 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.07■■□□□ 1.12
KRT40Q6A162 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
KRT40Q6A162 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.07■■□□□ 1.12
KRT40Q6A162 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.07■■□□□ 1.12
KRT40Q6A162 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.07■■□□□ 1.12
KRT40Q6A162 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.07■■□□□ 1.12
KRT40Q6A162 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KRT40Q6A162 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KRT40Q6A162 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.07■■□□□ 1.12
KRT40Q6A162 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
KRT40Q6A162 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
KRT40Q6A162 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
KRT40Q6A162 GOLGA6L5P-202ENST00000515341 1828 ntBASIC22.07■■□□□ 1.12
KRT40Q6A162 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
KRT40Q6A162 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
KRT40Q6A162 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms