Protein–RNA interactions for Protein: Q68CZ1

RPGRIP1L, Protein fantom, humanhuman

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1LQ68CZ1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 AL109659.2-201ENST00000606809 1674 ntBASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 MIR3180-1-201ENST00000580374 94 ntBASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 MIR3180-3-201ENST00000584616 94 ntBASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RPGRIP1LQ68CZ1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
RPGRIP1LQ68CZ1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC27.01■■□□□ 1.92
RPGRIP1LQ68CZ1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 TSSC2-201ENST00000450217 709 ntBASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 AL121672.3-201ENST00000608644 468 ntBASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 AC092119.3-201ENST00000612618 583 ntBASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 AC093525.10-201ENST00000625130 1569 ntBASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RPGRIP1LQ68CZ1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC27■■□□□ 1.91
RPGRIP1LQ68CZ1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC27■■□□□ 1.91
RPGRIP1LQ68CZ1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RPGRIP1LQ68CZ1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC27■■□□□ 1.91
RPGRIP1LQ68CZ1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC27■■□□□ 1.91
RPGRIP1LQ68CZ1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC27■■□□□ 1.91
RPGRIP1LQ68CZ1 TPM4P1-201ENST00000436100 807 ntBASIC27■■□□□ 1.91
RPGRIP1LQ68CZ1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC27■■□□□ 1.91
RPGRIP1LQ68CZ1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC27■■□□□ 1.91
RPGRIP1LQ68CZ1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC27■■□□□ 1.91
RPGRIP1LQ68CZ1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC27■■□□□ 1.91
RPGRIP1LQ68CZ1 AC012313.10-201ENST00000623509 926 ntBASIC27■■□□□ 1.91
RPGRIP1LQ68CZ1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RPGRIP1LQ68CZ1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RPGRIP1LQ68CZ1 KRT8P7-201ENST00000533003 1432 ntBASIC27■■□□□ 1.91
RPGRIP1LQ68CZ1 MIR662-201ENST00000384847 95 ntBASIC26.99■■□□□ 1.91
RPGRIP1LQ68CZ1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC26.99■■□□□ 1.91
RPGRIP1LQ68CZ1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RPGRIP1LQ68CZ1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
RPGRIP1LQ68CZ1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC26.99■■□□□ 1.91
RPGRIP1LQ68CZ1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RPGRIP1LQ68CZ1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC26.99■■□□□ 1.91
RPGRIP1LQ68CZ1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC26.99■■□□□ 1.91
RPGRIP1LQ68CZ1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RPGRIP1LQ68CZ1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC26.99■■□□□ 1.91
RPGRIP1LQ68CZ1 AL162741.1-201ENST00000565563 1558 ntBASIC26.99■■□□□ 1.91
RPGRIP1LQ68CZ1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC26.99■■□□□ 1.91
RPGRIP1LQ68CZ1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RPGRIP1LQ68CZ1 AL157888.1-201ENST00000631930 593 ntBASIC26.99■■□□□ 1.91
RPGRIP1LQ68CZ1 TEX21P-204ENST00000641479 1693 ntBASIC26.99■■□□□ 1.91
RPGRIP1LQ68CZ1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
RPGRIP1LQ68CZ1 TREX1-205ENST00000625293 1783 ntBASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 AC026396.1-201ENST00000419388 421 ntBASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 AL691432.3-201ENST00000621860 400 ntBASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC26.98■■□□□ 1.91
RPGRIP1LQ68CZ1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RPGRIP1LQ68CZ1 HOXB1-202ENST00000577092 1414 ntBASIC26.97■■□□□ 1.91
RPGRIP1LQ68CZ1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC26.97■■□□□ 1.91
RPGRIP1LQ68CZ1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms