Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PDS5AQ29RF7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
PDS5AQ29RF7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
PDS5AQ29RF7 STARP1-201ENST00000397973 869 ntBASIC22.89■■□□□ 1.26
PDS5AQ29RF7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.89■■□□□ 1.26
PDS5AQ29RF7 MIR3180-5-201ENST00000583743 153 ntBASIC22.89■■□□□ 1.26
PDS5AQ29RF7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
PDS5AQ29RF7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.89■■□□□ 1.25
PDS5AQ29RF7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDS5AQ29RF7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PDS5AQ29RF7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
PDS5AQ29RF7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
PDS5AQ29RF7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 MCCD1P1-208ENST00000445732 328 ntBASIC22.88■■□□□ 1.25
PDS5AQ29RF7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 AL121956.5-201ENST00000625261 221 ntBASIC22.88■■□□□ 1.25
PDS5AQ29RF7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 FEM1AP3-201ENST00000403722 1741 ntBASIC22.88■■□□□ 1.25
PDS5AQ29RF7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 AC141586.3-201ENST00000562166 1838 ntBASIC22.88■■□□□ 1.25
PDS5AQ29RF7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC22.88■■□□□ 1.25
PDS5AQ29RF7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 KRT18P38-201ENST00000449496 1282 ntBASIC22.87■■□□□ 1.25
PDS5AQ29RF7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 GCSHP2-201ENST00000560971 527 ntBASIC22.87■■□□□ 1.25
PDS5AQ29RF7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
PDS5AQ29RF7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.86■■□□□ 1.25
PDS5AQ29RF7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms