Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 MYL6-216ENST00000550184 1564 ntTSL 512.96□□□□□ -0.334e-8■□□□□ 10.6
LSM11P83369 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.384e-8■□□□□ 10.6
LSM11P83369 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.564e-8■□□□□ 10.6
LSM11P83369 MYL6-210ENST00000548400 573 ntTSL 3 BASIC11.35□□□□□ -0.594e-8■□□□□ 10.6
LSM11P83369 MYL6-215ENST00000549566 685 ntTSL 2 BASIC11.13□□□□□ -0.634e-8■□□□□ 10.6
LSM11P83369 MYL6-206ENST00000547408 683 ntTSL 3 BASIC9.05□□□□□ -0.964e-8■□□□□ 10.6
LSM11P83369 MYL6-205ENST00000546845 452 ntTSL 37.88□□□□□ -1.154e-8■□□□□ 10.6
LSM11P83369 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.174e-8■□□□□ 10.6
LSM11P83369 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC7.55□□□□□ -1.24e-8■□□□□ 10.6
LSM11P83369 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.74□□□□□ -1.334e-8■□□□□ 10.6
LSM11P83369 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.1□□□□□ -1.594e-8■□□□□ 10.6
LSM11P83369 MED24-220ENST00000579364 823 ntTSL 215.03■□□□□ -03e-10■□□□□ 10.6
LSM11P83369 MED24-205ENST00000422942 905 ntTSL 1 (best)14.13□□□□□ -0.153e-10■□□□□ 10.6
LSM11P83369 MED24-214ENST00000535508 3334 ntTSL 212.1□□□□□ -0.473e-10■□□□□ 10.6
LSM11P83369 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.53e-10■□□□□ 10.6
LSM11P83369 MED24-209ENST00000491466 957 ntTSL 511.65□□□□□ -0.543e-10■□□□□ 10.6
LSM11P83369 MED24-212ENST00000501516 3037 ntTSL 5 BASIC11.36□□□□□ -0.593e-10■□□□□ 10.6
LSM11P83369 MED24-201ENST00000356271 3446 ntTSL 2 BASIC11.28□□□□□ -0.63e-10■□□□□ 10.6
LSM11P83369 MED24-203ENST00000394127 3456 ntTSL 2 BASIC11.09□□□□□ -0.633e-10■□□□□ 10.6
LSM11P83369 MED24-202ENST00000394126 3896 ntTSL 1 (best) BASIC9.98□□□□□ -0.813e-10■□□□□ 10.6
LSM11P83369 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC8.29□□□□□ -1.083e-10■□□□□ 10.6
LSM11P83369 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.078e-7■□□□□ 10.6
LSM11P83369 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.168e-7■□□□□ 10.6
LSM11P83369 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.75□□□□□ -0.218e-7■□□□□ 10.6
LSM11P83369 BRD4-208ENST00000597315 892 ntTSL 523.43■■□□□ 1.345e-7■□□□□ 10.5
LSM11P83369 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.91■■□□□ 1.15e-7■□□□□ 10.5
LSM11P83369 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.615e-7■□□□□ 10.5
LSM11P83369 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.455e-7■□□□□ 10.5
LSM11P83369 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.47■□□□□ 0.395e-7■□□□□ 10.5
LSM11P83369 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.275e-7■□□□□ 10.5
LSM11P83369 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.37■□□□□ 0.215e-7■□□□□ 10.5
LSM11P83369 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.045e-7■□□□□ 10.5
LSM11P83369 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.045e-7■□□□□ 10.5
LSM11P83369 DNM1-204ENST00000441149 3286 ntTSL 1 (best)15.01□□□□□ -0.015e-7■□□□□ 10.5
LSM11P83369 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.015e-7■□□□□ 10.5
LSM11P83369 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.115e-7■□□□□ 10.5
LSM11P83369 NUMA1-217ENST00000540626 2276 ntTSL 213.98□□□□□ -0.175e-7■□□□□ 10.5
LSM11P83369 BRD4-205ENST00000594841 1821 ntAPPRIS ALT2 TSL 1 (best)13.43□□□□□ -0.265e-7■□□□□ 10.5
LSM11P83369 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.315e-7■□□□□ 10.5
LSM11P83369 NUP214-207ENST00000476004 502 ntTSL 313.07□□□□□ -0.325e-7■□□□□ 10.5
LSM11P83369 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.495e-7■□□□□ 10.5
LSM11P83369 NUP214-219ENST00000528406 393 ntTSL 311.84□□□□□ -0.515e-7■□□□□ 10.5
LSM11P83369 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.575e-7■□□□□ 10.5
LSM11P83369 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.595e-7■□□□□ 10.5
LSM11P83369 BRD4-210ENST00000601941 604 ntTSL 511.32□□□□□ -0.65e-7■□□□□ 10.5
LSM11P83369 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.615e-7■□□□□ 10.5
LSM11P83369 NUP214-211ENST00000498010 483 ntTSL 511□□□□□ -0.655e-7■□□□□ 10.5
LSM11P83369 NUMA1-220ENST00000541584 3557 ntAPPRIS ALT2 TSL 1 (best)10.6□□□□□ -0.715e-7■□□□□ 10.5
LSM11P83369 NUMA1-202ENST00000358965 7227 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.755e-7■□□□□ 10.5
LSM11P83369 TUBA1C-209ENST00000552448 1800 ntTSL 310.06□□□□□ -0.85e-7■□□□□ 10.5
LSM11P83369 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC9.75□□□□□ -0.855e-7■□□□□ 10.5
LSM11P83369 TUBA1C-202ENST00000541364 1695 ntTSL 2 BASIC9.58□□□□□ -0.885e-7■□□□□ 10.5
LSM11P83369 NUP214-204ENST00000453861 3208 ntTSL 59.53□□□□□ -0.885e-7■□□□□ 10.5
LSM11P83369 NUP214-210ENST00000496921 2977 ntTSL 1 (best)9.33□□□□□ -0.925e-7■□□□□ 10.5
LSM11P83369 TUBA1C-208ENST00000552125 575 ntTSL 49.31□□□□□ -0.925e-7■□□□□ 10.5
LSM11P83369 TUBA1C-204ENST00000549183 696 ntTSL 2 BASIC8.92□□□□□ -0.985e-7■□□□□ 10.5
LSM11P83369 NUMA1-201ENST00000351960 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.985e-7■□□□□ 10.5
LSM11P83369 TUBA1C-206ENST00000549818 536 ntTSL 48.53□□□□□ -1.045e-7■□□□□ 10.5
LSM11P83369 TUBA1C-210ENST00000639419 1075 ntTSL 5 BASIC8.45□□□□□ -1.065e-7■□□□□ 10.5
LSM11P83369 NRDC-204ENST00000464385 472 ntTSL 28.18□□□□□ -1.15e-7■□□□□ 10.5
LSM11P83369 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.155e-7■□□□□ 10.5
LSM11P83369 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.175e-7■□□□□ 10.5
LSM11P83369 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.33□□□□□ -1.245e-7■□□□□ 10.5
LSM11P83369 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.325e-7■□□□□ 10.5
LSM11P83369 PCYT2-216ENST00000574155 572 ntTSL 414.27□□□□□ -0.131e-8■□□□□ 10.5
LSM11P83369 TAF1D-205ENST00000526015 1735 ntTSL 1 (best)16.96■□□□□ 0.314e-6■□□□□ 10.5
LSM11P83369 TAF1D-201ENST00000323981 2540 ntTSL 212.96□□□□□ -0.334e-6■□□□□ 10.5
LSM11P83369 TAF1D-219ENST00000534079 656 ntTSL 212.1□□□□□ -0.474e-6■□□□□ 10.5
LSM11P83369 TAF1D-210ENST00000529435 1011 ntTSL 511.48□□□□□ -0.574e-6■□□□□ 10.5
LSM11P83369 TAF1D-222ENST00000546088 1728 ntTSL 311.41□□□□□ -0.584e-6■□□□□ 10.5
LSM11P83369 TAF1D-204ENST00000525928 1710 ntTSL 210.42□□□□□ -0.744e-6■□□□□ 10.5
LSM11P83369 TAF1D-202ENST00000393259 547 ntTSL 39.28□□□□□ -0.924e-6■□□□□ 10.5
LSM11P83369 TAF1D-215ENST00000530769 4358 ntTSL 27.06□□□□□ -1.284e-6■□□□□ 10.5
LSM11P83369 RNU6-45P-201ENST00000384471 107 ntBASIC6.67□□□□□ -1.342e-6■□□□□ 10.5
LSM11P83369 ARAP1-210ENST00000465814 5612 ntTSL 213.29□□□□□ -0.283e-6■□□□□ 10.5
LSM11P83369 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.293e-6■□□□□ 10.5
LSM11P83369 ARAP1-211ENST00000495878 2758 ntTSL 1 (best)12.44□□□□□ -0.423e-6■□□□□ 10.5
LSM11P83369 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.463e-6■□□□□ 10.5
LSM11P83369 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC11.99□□□□□ -0.493e-6■□□□□ 10.5
LSM11P83369 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.523e-6■□□□□ 10.5
LSM11P83369 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.38■□□□□ 0.856e-8■□□□□ 10.5
LSM11P83369 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.16e-8■□□□□ 10.5
LSM11P83369 ENO2-210ENST00000539713 543 ntTSL 414.08□□□□□ -0.166e-8■□□□□ 10.5
LSM11P83369 ENO2-207ENST00000537688 547 ntTSL 513.75□□□□□ -0.216e-8■□□□□ 10.5
LSM11P83369 KLF3-202ENST00000482150 517 ntTSL 212.42□□□□□ -0.426e-8■□□□□ 10.5
LSM11P83369 ENO2-212ENST00000542509 825 ntTSL 512.29□□□□□ -0.446e-8■□□□□ 10.5
LSM11P83369 SEC24C-203ENST00000465076 4668 ntTSL 1 (best)9.8□□□□□ -0.846e-8■□□□□ 10.5
LSM11P83369 SEC24C-201ENST00000339365 4513 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.896e-8■□□□□ 10.5
LSM11P83369 SEC24C-202ENST00000345254 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.066e-8■□□□□ 10.5
LSM11P83369 MAN2C1-230ENST00000566099 1316 ntTSL 519.53■□□□□ 0.721e-7■□□□□ 10.5
LSM11P83369 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.33■□□□□ 0.531e-7■□□□□ 10.5
LSM11P83369 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.21□□□□□ -0.291e-7■□□□□ 10.5
LSM11P83369 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.08□□□□□ -0.481e-7■□□□□ 10.5
LSM11P83369 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.551e-7■□□□□ 10.5
LSM11P83369 MAN2C1-224ENST00000565683 3300 ntTSL 1 (best) BASIC11.35□□□□□ -0.591e-7■□□□□ 10.5
LSM11P83369 SAT1-207ENST00000474223 1033 ntTSL 211.53□□□□□ -0.564e-13■□□□□ 10.5
LSM11P83369 HNRNPH1-244ENST00000523136 143 ntTSL 415.03■□□□□ -04e-8■□□□□ 10.5
LSM11P83369 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.686e-7■□□□□ 10.5
LSM11P83369 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.196e-7■□□□□ 10.5
LSM11P83369 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.366e-7■□□□□ 10.5
Retrieved 100 of 11,495 protein–RNA pairs in 18.7 ms