Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.81■□□□□ 0.76
IRX4P78413 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 AC073508.3-201ENST00000619697 1419 ntBASIC19.81■□□□□ 0.76
IRX4P78413 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IRX4P78413 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.81■□□□□ 0.76
IRX4P78413 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.81■□□□□ 0.76
IRX4P78413 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.8■□□□□ 0.76
IRX4P78413 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX4P78413 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
IRX4P78413 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX4P78413 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.8■□□□□ 0.76
IRX4P78413 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX4P78413 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX4P78413 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
IRX4P78413 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.8■□□□□ 0.76
IRX4P78413 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX4P78413 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
IRX4P78413 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
IRX4P78413 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.8■□□□□ 0.76
IRX4P78413 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.8■□□□□ 0.76
IRX4P78413 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.8■□□□□ 0.76
IRX4P78413 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
IRX4P78413 AC010947.1-201ENST00000623454 693 ntBASIC19.8■□□□□ 0.76
IRX4P78413 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.8■□□□□ 0.76
IRX4P78413 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.8■□□□□ 0.76
IRX4P78413 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX4P78413 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX4P78413 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.8■□□□□ 0.76
IRX4P78413 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX4P78413 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
IRX4P78413 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
IRX4P78413 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
IRX4P78413 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX4P78413 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX4P78413 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX4P78413 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
IRX4P78413 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.79■□□□□ 0.76
IRX4P78413 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX4P78413 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX4P78413 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.79■□□□□ 0.76
IRX4P78413 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX4P78413 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX4P78413 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX4P78413 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX4P78413 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.79■□□□□ 0.76
IRX4P78413 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.79■□□□□ 0.76
IRX4P78413 AC104076.2-201ENST00000448912 469 ntBASIC19.79■□□□□ 0.76
IRX4P78413 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.79■□□□□ 0.76
IRX4P78413 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.79■□□□□ 0.76
IRX4P78413 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.79■□□□□ 0.76
IRX4P78413 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.79■□□□□ 0.76
IRX4P78413 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX4P78413 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX4P78413 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX4P78413 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IRX4P78413 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.79■□□□□ 0.76
IRX4P78413 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX4P78413 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
IRX4P78413 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX4P78413 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IRX4P78413 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
IRX4P78413 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.78■□□□□ 0.76
IRX4P78413 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX4P78413 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.78■□□□□ 0.76
IRX4P78413 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.78■□□□□ 0.76
IRX4P78413 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX4P78413 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX4P78413 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX4P78413 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IRX4P78413 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.78■□□□□ 0.76
IRX4P78413 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
IRX4P78413 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
IRX4P78413 DUX4L26-201ENST00000489078 1255 ntBASIC19.78■□□□□ 0.76
IRX4P78413 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.78■□□□□ 0.76
IRX4P78413 FITM1-202ENST00000559294 800 ntBASIC19.78■□□□□ 0.76
IRX4P78413 AL121906.2-201ENST00000621597 723 ntBASIC19.78■□□□□ 0.76
IRX4P78413 CR392000.1-201ENST00000624770 1228 ntBASIC19.78■□□□□ 0.76
IRX4P78413 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
IRX4P78413 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX4P78413 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
IRX4P78413 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IRX4P78413 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
IRX4P78413 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
IRX4P78413 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
IRX4P78413 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
IRX4P78413 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
IRX4P78413 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
IRX4P78413 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IRX4P78413 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IRX4P78413 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
IRX4P78413 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
IRX4P78413 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
IRX4P78413 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IRX4P78413 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.77■□□□□ 0.76
IRX4P78413 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.77■□□□□ 0.76
IRX4P78413 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
IRX4P78413 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IRX4P78413 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IRX4P78413 TNXA-203ENST00000507684 2038 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms