Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CMC4P56277 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CMC4P56277 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CMC4P56277 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CMC4P56277 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.23□□□□□ -0.13
CMC4P56277 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CMC4P56277 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CMC4P56277 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.23□□□□□ -0.13
CMC4P56277 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.23□□□□□ -0.13
CMC4P56277 AC096733.2-201ENST00000609937 1394 ntBASIC14.23□□□□□ -0.13
CMC4P56277 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.23□□□□□ -0.13
CMC4P56277 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CMC4P56277 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CMC4P56277 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CMC4P56277 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.23□□□□□ -0.13
CMC4P56277 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CMC4P56277 CCR12P-201ENST00000446203 998 ntBASIC14.23□□□□□ -0.13
CMC4P56277 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.23□□□□□ -0.13
CMC4P56277 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.23□□□□□ -0.13
CMC4P56277 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.23□□□□□ -0.13
CMC4P56277 FITM1-202ENST00000559294 800 ntBASIC14.23□□□□□ -0.13
CMC4P56277 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.23□□□□□ -0.13
CMC4P56277 CKBP1-201ENST00000565489 1086 ntBASIC14.23□□□□□ -0.13
CMC4P56277 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.23□□□□□ -0.13
CMC4P56277 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.23□□□□□ -0.13
CMC4P56277 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CMC4P56277 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CMC4P56277 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CMC4P56277 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CMC4P56277 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CMC4P56277 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CMC4P56277 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.23□□□□□ -0.13
CMC4P56277 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CMC4P56277 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CMC4P56277 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
CMC4P56277 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CMC4P56277 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.22□□□□□ -0.13
CMC4P56277 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMC4P56277 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CMC4P56277 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CMC4P56277 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMC4P56277 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMC4P56277 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CMC4P56277 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMC4P56277 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMC4P56277 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CMC4P56277 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CMC4P56277 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMC4P56277 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMC4P56277 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
CMC4P56277 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.22□□□□□ -0.13
CMC4P56277 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMC4P56277 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.22□□□□□ -0.13
CMC4P56277 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CMC4P56277 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.22□□□□□ -0.13
CMC4P56277 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.22□□□□□ -0.13
CMC4P56277 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.22□□□□□ -0.13
CMC4P56277 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.22□□□□□ -0.13
CMC4P56277 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.22□□□□□ -0.13
CMC4P56277 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMC4P56277 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMC4P56277 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.22□□□□□ -0.13
CMC4P56277 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMC4P56277 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CMC4P56277 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMC4P56277 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CMC4P56277 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CMC4P56277 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
CMC4P56277 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.21□□□□□ -0.13
CMC4P56277 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.21□□□□□ -0.13
CMC4P56277 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CMC4P56277 MESTP1-201ENST00000404287 994 ntBASIC14.21□□□□□ -0.13
CMC4P56277 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
CMC4P56277 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 SLC25A1P2-201ENST00000430693 912 ntBASIC14.21□□□□□ -0.13
CMC4P56277 TSPY17P-201ENST00000450329 467 ntBASIC14.21□□□□□ -0.13
CMC4P56277 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.21□□□□□ -0.13
CMC4P56277 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CMC4P56277 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CMC4P56277 AC125437.2-201ENST00000625180 2167 ntBASIC14.21□□□□□ -0.13
CMC4P56277 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CMC4P56277 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms