Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 TUBB8P6-201ENST00000436895 1288 ntBASIC19.58■□□□□ 0.72
ITGA8P53708 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.58■□□□□ 0.72
ITGA8P53708 AC083906.2-201ENST00000511578 360 ntBASIC19.58■□□□□ 0.72
ITGA8P53708 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.58■□□□□ 0.72
ITGA8P53708 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.58■□□□□ 0.72
ITGA8P53708 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.58■□□□□ 0.72
ITGA8P53708 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ITGA8P53708 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.58■□□□□ 0.72
ITGA8P53708 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ITGA8P53708 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ITGA8P53708 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ITGA8P53708 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.58■□□□□ 0.72
ITGA8P53708 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
ITGA8P53708 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ITGA8P53708 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ITGA8P53708 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
ITGA8P53708 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.57■□□□□ 0.72
ITGA8P53708 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
ITGA8P53708 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.57■□□□□ 0.72
ITGA8P53708 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 AL121832.2-201ENST00000610979 668 ntBASIC19.57■□□□□ 0.72
ITGA8P53708 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.57■□□□□ 0.72
ITGA8P53708 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ITGA8P53708 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.57■□□□□ 0.72
ITGA8P53708 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.57■□□□□ 0.72
ITGA8P53708 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.57■□□□□ 0.72
ITGA8P53708 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.57■□□□□ 0.72
ITGA8P53708 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.56■□□□□ 0.72
ITGA8P53708 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.56■□□□□ 0.72
ITGA8P53708 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ITGA8P53708 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 AL133373.2-201ENST00000623187 2828 ntBASIC19.56■□□□□ 0.72
ITGA8P53708 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.56■□□□□ 0.72
ITGA8P53708 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.56■□□□□ 0.72
ITGA8P53708 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.56■□□□□ 0.72
ITGA8P53708 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.56■□□□□ 0.72
ITGA8P53708 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.56■□□□□ 0.72
ITGA8P53708 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.56■□□□□ 0.72
ITGA8P53708 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 AC083906.6-201ENST00000641366 219 ntBASIC19.56■□□□□ 0.72
ITGA8P53708 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.56■□□□□ 0.72
ITGA8P53708 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.56■□□□□ 0.72
ITGA8P53708 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
ITGA8P53708 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ITGA8P53708 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ITGA8P53708 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ITGA8P53708 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ITGA8P53708 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ITGA8P53708 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.55■□□□□ 0.72
ITGA8P53708 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ITGA8P53708 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ITGA8P53708 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ITGA8P53708 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ITGA8P53708 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.55■□□□□ 0.72
ITGA8P53708 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ITGA8P53708 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.55■□□□□ 0.72
ITGA8P53708 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.55■□□□□ 0.72
ITGA8P53708 HLA-B-256ENST00000639848 1089 ntBASIC19.55■□□□□ 0.72
ITGA8P53708 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ITGA8P53708 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ITGA8P53708 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.54■□□□□ 0.72
ITGA8P53708 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.54■□□□□ 0.72
ITGA8P53708 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
ITGA8P53708 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.54■□□□□ 0.72
ITGA8P53708 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ITGA8P53708 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.54■□□□□ 0.72
ITGA8P53708 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA8P53708 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA8P53708 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms