Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.84■□□□□ 0.93
CDR1P51861 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CDR1P51861 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
CDR1P51861 OR6D1P-202ENST00000641007 5290 ntBASIC20.84■□□□□ 0.93
CDR1P51861 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.84■□□□□ 0.93
CDR1P51861 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDR1P51861 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.84■□□□□ 0.93
CDR1P51861 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CDR1P51861 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDR1P51861 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDR1P51861 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CDR1P51861 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CDR1P51861 AL355355.2-201ENST00000442321 338 ntBASIC20.84■□□□□ 0.93
CDR1P51861 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.84■□□□□ 0.93
CDR1P51861 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.84■□□□□ 0.93
CDR1P51861 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDR1P51861 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDR1P51861 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CDR1P51861 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDR1P51861 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDR1P51861 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDR1P51861 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.84■□□□□ 0.93
CDR1P51861 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDR1P51861 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDR1P51861 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDR1P51861 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDR1P51861 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDR1P51861 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDR1P51861 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDR1P51861 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDR1P51861 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CDR1P51861 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CDR1P51861 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDR1P51861 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDR1P51861 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDR1P51861 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.83■□□□□ 0.93
CDR1P51861 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDR1P51861 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDR1P51861 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDR1P51861 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.83■□□□□ 0.93
CDR1P51861 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.83■□□□□ 0.93
CDR1P51861 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDR1P51861 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDR1P51861 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDR1P51861 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDR1P51861 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.83■□□□□ 0.93
CDR1P51861 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.83■□□□□ 0.93
CDR1P51861 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.83■□□□□ 0.93
CDR1P51861 MIR4785-201ENST00000585005 73 ntBASIC20.83■□□□□ 0.93
CDR1P51861 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.83■□□□□ 0.93
CDR1P51861 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.83■□□□□ 0.93
CDR1P51861 AP001412.1-201ENST00000608405 714 ntBASIC20.83■□□□□ 0.93
CDR1P51861 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.83■□□□□ 0.92
CDR1P51861 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDR1P51861 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDR1P51861 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.83■□□□□ 0.92
CDR1P51861 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDR1P51861 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CDR1P51861 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDR1P51861 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.83■□□□□ 0.92
CDR1P51861 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDR1P51861 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
CDR1P51861 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.83■□□□□ 0.92
CDR1P51861 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDR1P51861 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CDR1P51861 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.82■□□□□ 0.92
CDR1P51861 KRT17P2-201ENST00000300992 1314 ntBASIC20.82■□□□□ 0.92
CDR1P51861 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.82■□□□□ 0.92
CDR1P51861 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDR1P51861 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.82■□□□□ 0.92
CDR1P51861 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDR1P51861 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDR1P51861 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.82■□□□□ 0.92
CDR1P51861 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDR1P51861 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDR1P51861 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CDR1P51861 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDR1P51861 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CDR1P51861 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDR1P51861 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDR1P51861 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.82■□□□□ 0.92
CDR1P51861 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.82■□□□□ 0.92
CDR1P51861 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.82■□□□□ 0.92
CDR1P51861 AC073912.3-201ENST00000624414 853 ntBASIC20.82■□□□□ 0.92
CDR1P51861 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.82■□□□□ 0.92
CDR1P51861 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.82■□□□□ 0.92
CDR1P51861 TCF3P1-201ENST00000423021 1937 ntBASIC20.82■□□□□ 0.92
CDR1P51861 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDR1P51861 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.82■□□□□ 0.92
CDR1P51861 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDR1P51861 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDR1P51861 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDR1P51861 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDR1P51861 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDR1P51861 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDR1P51861 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDR1P51861 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDR1P51861 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDR1P51861 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDR1P51861 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms