Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.43■□□□□ 0.54
SLC6A12P48065 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A12P48065 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A12P48065 AL031598.1-201ENST00000561511 1773 ntBASIC18.42■□□□□ 0.54
SLC6A12P48065 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SLC6A12P48065 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC6A12P48065 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A12P48065 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A12P48065 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SLC6A12P48065 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A12P48065 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC6A12P48065 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC6A12P48065 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A12P48065 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A12P48065 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A12P48065 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC6A12P48065 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC6A12P48065 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A12P48065 MESTP1-201ENST00000404287 994 ntBASIC18.42■□□□□ 0.54
SLC6A12P48065 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A12P48065 FAM197Y1-201ENST00000421178 764 ntBASIC18.42■□□□□ 0.54
SLC6A12P48065 B3GAT3P1-201ENST00000471720 806 ntBASIC18.42■□□□□ 0.54
SLC6A12P48065 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A12P48065 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC6A12P48065 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC6A12P48065 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A12P48065 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC6A12P48065 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC6A12P48065 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC6A12P48065 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SLC6A12P48065 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SLC6A12P48065 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC6A12P48065 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A12P48065 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SLC6A12P48065 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
SLC6A12P48065 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A12P48065 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC6A12P48065 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC6A12P48065 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC6A12P48065 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A12P48065 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A12P48065 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A12P48065 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A12P48065 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A12P48065 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A12P48065 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A12P48065 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
SLC6A12P48065 RPS2P55-201ENST00000397318 883 ntBASIC18.41■□□□□ 0.54
SLC6A12P48065 AC107956.1-201ENST00000494359 873 ntBASIC18.41■□□□□ 0.54
SLC6A12P48065 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC6A12P48065 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SLC6A12P48065 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.41■□□□□ 0.54
SLC6A12P48065 CD177P1-201ENST00000606252 935 ntBASIC18.41■□□□□ 0.54
SLC6A12P48065 MIR6786-201ENST00000616843 113 ntBASIC18.41■□□□□ 0.54
SLC6A12P48065 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
SLC6A12P48065 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC6A12P48065 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A12P48065 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A12P48065 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A12P48065 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC6A12P48065 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
SLC6A12P48065 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A12P48065 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A12P48065 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC6A12P48065 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A12P48065 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SLC6A12P48065 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A12P48065 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A12P48065 AC012618.2-201ENST00000428058 849 ntBASIC18.4■□□□□ 0.54
SLC6A12P48065 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC6A12P48065 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC6A12P48065 AC233702.5-201ENST00000584107 538 ntBASIC18.4■□□□□ 0.54
SLC6A12P48065 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC6A12P48065 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC6A12P48065 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A12P48065 AL512353.2-201ENST00000448759 1962 ntBASIC18.4■□□□□ 0.54
SLC6A12P48065 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC6A12P48065 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC6A12P48065 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A12P48065 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC6A12P48065 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC6A12P48065 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC6A12P48065 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC6A12P48065 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC6A12P48065 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC6A12P48065 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC6A12P48065 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
SLC6A12P48065 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC6A12P48065 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SLC6A12P48065 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A12P48065 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A12P48065 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC6A12P48065 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC6A12P48065 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC6A12P48065 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC6A12P48065 CKBP1-201ENST00000565489 1086 ntBASIC18.39■□□□□ 0.53
SLC6A12P48065 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC6A12P48065 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A12P48065 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms