Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.06■□□□□ 0.96
RFC5P40937 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFC5P40937 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFC5P40937 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RFC5P40937 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFC5P40937 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFC5P40937 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFC5P40937 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFC5P40937 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.05■□□□□ 0.96
RFC5P40937 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFC5P40937 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.05■□□□□ 0.96
RFC5P40937 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.05■□□□□ 0.96
RFC5P40937 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.05■□□□□ 0.96
RFC5P40937 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
RFC5P40937 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RFC5P40937 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFC5P40937 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFC5P40937 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFC5P40937 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFC5P40937 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFC5P40937 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFC5P40937 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RFC5P40937 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFC5P40937 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC5P40937 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC5P40937 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC5P40937 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC5P40937 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.04■□□□□ 0.96
RFC5P40937 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC5P40937 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RFC5P40937 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC5P40937 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
RFC5P40937 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.04■□□□□ 0.96
RFC5P40937 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC5P40937 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.04■□□□□ 0.96
RFC5P40937 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.04■□□□□ 0.96
RFC5P40937 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.04■□□□□ 0.96
RFC5P40937 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RFC5P40937 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.04■□□□□ 0.96
RFC5P40937 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFC5P40937 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.04■□□□□ 0.96
RFC5P40937 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC5P40937 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.04■□□□□ 0.96
RFC5P40937 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC5P40937 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC5P40937 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC5P40937 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFC5P40937 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.04■□□□□ 0.96
RFC5P40937 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFC5P40937 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
RFC5P40937 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC5P40937 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.03■□□□□ 0.96
RFC5P40937 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC5P40937 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC5P40937 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC5P40937 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC5P40937 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.03■□□□□ 0.96
RFC5P40937 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC5P40937 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFC5P40937 AL138966.2-201ENST00000621997 464 ntBASIC21.03■□□□□ 0.96
RFC5P40937 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RFC5P40937 AC141586.3-201ENST00000562166 1838 ntBASIC21.03■□□□□ 0.96
RFC5P40937 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFC5P40937 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC5P40937 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC5P40937 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
RFC5P40937 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC5P40937 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.03■□□□□ 0.96
RFC5P40937 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC5P40937 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.03■□□□□ 0.96
RFC5P40937 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.03■□□□□ 0.96
RFC5P40937 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RFC5P40937 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFC5P40937 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RFC5P40937 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.02■□□□□ 0.96
RFC5P40937 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.02■□□□□ 0.96
RFC5P40937 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC5P40937 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC5P40937 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RFC5P40937 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC5P40937 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFC5P40937 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.02■□□□□ 0.96
RFC5P40937 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
RFC5P40937 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFC5P40937 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.02■□□□□ 0.96
RFC5P40937 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.02■□□□□ 0.96
RFC5P40937 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.02■□□□□ 0.96
RFC5P40937 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC5P40937 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFC5P40937 KRT8P3-201ENST00000519669 1449 ntBASIC21.02■□□□□ 0.96
RFC5P40937 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RFC5P40937 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RFC5P40937 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.01■□□□□ 0.95
RFC5P40937 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC5P40937 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RFC5P40937 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RFC5P40937 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC5P40937 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
RFC5P40937 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RFC5P40937 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms