Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC12P31275 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC12P31275 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
HOXC12P31275 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC12P31275 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HOXC12P31275 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC12P31275 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
HOXC12P31275 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXC12P31275 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC12P31275 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXC12P31275 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.93■□□□□ 0.3
HOXC12P31275 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HOXC12P31275 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HOXC12P31275 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC12P31275 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC12P31275 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXC12P31275 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC12P31275 OR6D1P-202ENST00000641007 5290 ntBASIC16.93■□□□□ 0.3
HOXC12P31275 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC12P31275 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HOXC12P31275 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC12P31275 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC12P31275 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC12P31275 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HOXC12P31275 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
HOXC12P31275 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.93■□□□□ 0.3
HOXC12P31275 SLC25A3P1-201ENST00000443844 931 ntBASIC16.93■□□□□ 0.3
HOXC12P31275 AC104076.2-201ENST00000448912 469 ntBASIC16.93■□□□□ 0.3
HOXC12P31275 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC12P31275 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
HOXC12P31275 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXC12P31275 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HOXC12P31275 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.93■□□□□ 0.3
HOXC12P31275 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.93■□□□□ 0.3
HOXC12P31275 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.93■□□□□ 0.3
HOXC12P31275 AC010947.1-201ENST00000623454 693 ntBASIC16.93■□□□□ 0.3
HOXC12P31275 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
HOXC12P31275 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXC12P31275 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC12P31275 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.93■□□□□ 0.3
HOXC12P31275 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.93■□□□□ 0.3
HOXC12P31275 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXC12P31275 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC12P31275 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HOXC12P31275 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC12P31275 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC12P31275 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC12P31275 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC12P31275 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HOXC12P31275 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC12P31275 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC12P31275 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HOXC12P31275 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC12P31275 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC12P31275 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC12P31275 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC12P31275 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC12P31275 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HOXC12P31275 AC004980.1-204ENST00000429707 299 ntBASIC16.92■□□□□ 0.3
HOXC12P31275 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC12P31275 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HOXC12P31275 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC12P31275 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.92■□□□□ 0.3
HOXC12P31275 AC116562.2-201ENST00000507042 360 ntBASIC16.92■□□□□ 0.3
HOXC12P31275 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC12P31275 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC12P31275 AC087388.1-201ENST00000571370 1112 ntBASIC16.92■□□□□ 0.3
HOXC12P31275 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXC12P31275 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC12P31275 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HOXC12P31275 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC12P31275 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXC12P31275 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC12P31275 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC12P31275 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC12P31275 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC12P31275 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC12P31275 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC12P31275 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC12P31275 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC12P31275 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.91■□□□□ 0.3
HOXC12P31275 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HOXC12P31275 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC12P31275 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC12P31275 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXC12P31275 AC004951.3-201ENST00000418645 1148 ntBASIC16.91■□□□□ 0.3
HOXC12P31275 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.91■□□□□ 0.3
HOXC12P31275 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.91■□□□□ 0.3
HOXC12P31275 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXC12P31275 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.91■□□□□ 0.3
HOXC12P31275 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC12P31275 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC12P31275 DGCR10-201ENST00000609839 495 ntBASIC16.91■□□□□ 0.3
HOXC12P31275 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC12P31275 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC12P31275 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC12P31275 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HOXC12P31275 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC12P31275 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXC12P31275 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms