Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
HOXC8P31273 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC8P31273 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.85■□□□□ 0.93
HOXC8P31273 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC8P31273 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC8P31273 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.84■□□□□ 0.93
HOXC8P31273 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC8P31273 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC8P31273 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC8P31273 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
HOXC8P31273 HLA-F-220ENST00000434407 884 ntBASIC20.84■□□□□ 0.93
HOXC8P31273 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.84■□□□□ 0.93
HOXC8P31273 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.84■□□□□ 0.93
HOXC8P31273 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.84■□□□□ 0.93
HOXC8P31273 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.84■□□□□ 0.93
HOXC8P31273 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HOXC8P31273 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HOXC8P31273 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC8P31273 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.84■□□□□ 0.93
HOXC8P31273 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.84■□□□□ 0.93
HOXC8P31273 AC079602.3-201ENST00000623931 403 ntBASIC20.84■□□□□ 0.93
HOXC8P31273 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC8P31273 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HOXC8P31273 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
HOXC8P31273 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC8P31273 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.84■□□□□ 0.93
HOXC8P31273 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC8P31273 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.84■□□□□ 0.93
HOXC8P31273 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
HOXC8P31273 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.84■□□□□ 0.93
HOXC8P31273 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HOXC8P31273 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXC8P31273 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXC8P31273 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
HOXC8P31273 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
HOXC8P31273 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.83■□□□□ 0.93
HOXC8P31273 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXC8P31273 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXC8P31273 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
HOXC8P31273 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HOXC8P31273 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.83■□□□□ 0.93
HOXC8P31273 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HOXC8P31273 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HOXC8P31273 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HOXC8P31273 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.83■□□□□ 0.92
HOXC8P31273 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HOXC8P31273 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HOXC8P31273 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
HOXC8P31273 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC8P31273 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.82■□□□□ 0.92
HOXC8P31273 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXC8P31273 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC8P31273 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HOXC8P31273 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC8P31273 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXC8P31273 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC8P31273 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.82■□□□□ 0.92
HOXC8P31273 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC8P31273 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.82■□□□□ 0.92
HOXC8P31273 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.82■□□□□ 0.92
HOXC8P31273 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXC8P31273 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXC8P31273 AL109659.2-201ENST00000606809 1674 ntBASIC20.82■□□□□ 0.92
HOXC8P31273 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HOXC8P31273 LINC01521-201ENST00000504184 1943 ntBASIC20.82■□□□□ 0.92
HOXC8P31273 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC8P31273 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HOXC8P31273 AC125437.2-201ENST00000625180 2167 ntBASIC20.82■□□□□ 0.92
HOXC8P31273 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC8P31273 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC8P31273 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.81■□□□□ 0.92
HOXC8P31273 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC8P31273 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC8P31273 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC8P31273 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.81■□□□□ 0.92
HOXC8P31273 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.81■□□□□ 0.92
HOXC8P31273 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
HOXC8P31273 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC8P31273 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC8P31273 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC8P31273 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC8P31273 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC8P31273 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.81■□□□□ 0.92
HOXC8P31273 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.81■□□□□ 0.92
HOXC8P31273 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.81■□□□□ 0.92
HOXC8P31273 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC8P31273 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC8P31273 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
HOXC8P31273 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC8P31273 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC8P31273 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC8P31273 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC8P31273 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC8P31273 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC8P31273 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC8P31273 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.8■□□□□ 0.92
HOXC8P31273 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC8P31273 Z82202.1-201ENST00000623446 1880 ntBASIC20.8■□□□□ 0.92
HOXC8P31273 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC8P31273 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms