Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN6P29350 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PTPN6P29350 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN6P29350 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN6P29350 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN6P29350 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN6P29350 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN6P29350 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN6P29350 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN6P29350 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.11■□□□□ 0.49
PTPN6P29350 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PTPN6P29350 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.11■□□□□ 0.49
PTPN6P29350 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PTPN6P29350 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PTPN6P29350 AL158047.1-201ENST00000445918 881 ntBASIC18.11■□□□□ 0.49
PTPN6P29350 RPPH1-201ENST00000516869 333 ntBASIC18.11■□□□□ 0.49
PTPN6P29350 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN6P29350 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PTPN6P29350 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.11■□□□□ 0.49
PTPN6P29350 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPN6P29350 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN6P29350 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN6P29350 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN6P29350 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN6P29350 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN6P29350 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN6P29350 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN6P29350 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN6P29350 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN6P29350 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN6P29350 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN6P29350 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN6P29350 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.1■□□□□ 0.49
PTPN6P29350 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PTPN6P29350 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN6P29350 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN6P29350 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN6P29350 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN6P29350 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN6P29350 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN6P29350 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PTPN6P29350 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN6P29350 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN6P29350 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.1■□□□□ 0.49
PTPN6P29350 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN6P29350 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN6P29350 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN6P29350 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN6P29350 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN6P29350 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN6P29350 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PTPN6P29350 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN6P29350 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN6P29350 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PTPN6P29350 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN6P29350 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN6P29350 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.09■□□□□ 0.49
PTPN6P29350 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN6P29350 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PTPN6P29350 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN6P29350 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
PTPN6P29350 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN6P29350 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PTPN6P29350 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN6P29350 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PTPN6P29350 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.09■□□□□ 0.49
PTPN6P29350 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.09■□□□□ 0.49
PTPN6P29350 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN6P29350 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.09■□□□□ 0.49
PTPN6P29350 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.09■□□□□ 0.49
PTPN6P29350 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.09■□□□□ 0.49
PTPN6P29350 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN6P29350 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN6P29350 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN6P29350 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN6P29350 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PTPN6P29350 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
PTPN6P29350 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN6P29350 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN6P29350 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN6P29350 AC007613.1-201ENST00000572811 2597 ntBASIC18.08■□□□□ 0.49
PTPN6P29350 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PTPN6P29350 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
PTPN6P29350 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN6P29350 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PTPN6P29350 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN6P29350 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN6P29350 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN6P29350 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN6P29350 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN6P29350 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN6P29350 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.08■□□□□ 0.48
PTPN6P29350 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN6P29350 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN6P29350 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.08■□□□□ 0.48
PTPN6P29350 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.08■□□□□ 0.48
PTPN6P29350 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
PTPN6P29350 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN6P29350 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.08■□□□□ 0.48
PTPN6P29350 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms