Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.28■□□□□ 0.68
SRPRAP08240 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.28■□□□□ 0.68
SRPRAP08240 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.28■□□□□ 0.68
SRPRAP08240 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.28■□□□□ 0.68
SRPRAP08240 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.28■□□□□ 0.68
SRPRAP08240 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.28■□□□□ 0.68
SRPRAP08240 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SRPRAP08240 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SRPRAP08240 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRPRAP08240 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.28■□□□□ 0.68
SRPRAP08240 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.28■□□□□ 0.68
SRPRAP08240 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.28■□□□□ 0.68
SRPRAP08240 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRPRAP08240 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRPRAP08240 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRPRAP08240 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRPRAP08240 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRPRAP08240 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SRPRAP08240 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SRPRAP08240 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.27■□□□□ 0.68
SRPRAP08240 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRPRAP08240 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.27■□□□□ 0.68
SRPRAP08240 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRPRAP08240 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRPRAP08240 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SRPRAP08240 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.27■□□□□ 0.68
SRPRAP08240 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SRPRAP08240 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRPRAP08240 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRPRAP08240 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.27■□□□□ 0.68
SRPRAP08240 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SRPRAP08240 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.27■□□□□ 0.67
SRPRAP08240 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SRPRAP08240 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
SRPRAP08240 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRPRAP08240 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRPRAP08240 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRPRAP08240 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.26■□□□□ 0.67
SRPRAP08240 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SRPRAP08240 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
SRPRAP08240 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.26■□□□□ 0.67
SRPRAP08240 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SRPRAP08240 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRPRAP08240 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.26■□□□□ 0.67
SRPRAP08240 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.26■□□□□ 0.67
SRPRAP08240 AP000523.1-201ENST00000398242 1049 ntBASIC19.26■□□□□ 0.67
SRPRAP08240 TSPY5P-201ENST00000426936 936 ntBASIC19.26■□□□□ 0.67
SRPRAP08240 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.26■□□□□ 0.67
SRPRAP08240 AC022616.7-201ENST00000525383 220 ntBASIC19.26■□□□□ 0.67
SRPRAP08240 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.26■□□□□ 0.67
SRPRAP08240 NTF6B-201ENST00000591913 560 ntBASIC19.26■□□□□ 0.67
SRPRAP08240 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRPRAP08240 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.26■□□□□ 0.67
SRPRAP08240 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRPRAP08240 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SRPRAP08240 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRPRAP08240 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SRPRAP08240 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.25■□□□□ 0.67
SRPRAP08240 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SRPRAP08240 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.25■□□□□ 0.67
SRPRAP08240 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.25■□□□□ 0.67
SRPRAP08240 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.25■□□□□ 0.67
SRPRAP08240 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRPRAP08240 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRPRAP08240 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRPRAP08240 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRPRAP08240 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.25■□□□□ 0.67
SRPRAP08240 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.25■□□□□ 0.67
SRPRAP08240 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.25■□□□□ 0.67
SRPRAP08240 WWOX-216ENST00000569818 525 ntBASIC19.25■□□□□ 0.67
SRPRAP08240 NEK4P2-201ENST00000580004 1012 ntBASIC19.25■□□□□ 0.67
SRPRAP08240 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SRPRAP08240 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRPRAP08240 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.25■□□□□ 0.67
SRPRAP08240 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRPRAP08240 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRPRAP08240 KRT8P3-201ENST00000519669 1449 ntBASIC19.25■□□□□ 0.67
SRPRAP08240 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRPRAP08240 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
SRPRAP08240 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.24■□□□□ 0.67
SRPRAP08240 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.24■□□□□ 0.67
SRPRAP08240 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRPRAP08240 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.24■□□□□ 0.67
SRPRAP08240 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.24■□□□□ 0.67
SRPRAP08240 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SRPRAP08240 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRPRAP08240 FAM8A6P-201ENST00000407496 1135 ntBASIC19.24■□□□□ 0.67
SRPRAP08240 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.24■□□□□ 0.67
SRPRAP08240 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.24■□□□□ 0.67
SRPRAP08240 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRPRAP08240 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRPRAP08240 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.24■□□□□ 0.67
SRPRAP08240 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.24■□□□□ 0.67
SRPRAP08240 AC140113.3-201ENST00000605663 199 ntBASIC19.24■□□□□ 0.67
SRPRAP08240 AC008622.2-201ENST00000617006 1229 ntBASIC19.24■□□□□ 0.67
SRPRAP08240 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRPRAP08240 AC011558.1-201ENST00000623459 338 ntBASIC19.24■□□□□ 0.67
SRPRAP08240 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SRPRAP08240 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRPRAP08240 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms