Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNAP02545 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNAP02545 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LMNAP02545 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNAP02545 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNAP02545 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNAP02545 FAM86EP-206ENST00000510506 987 ntBASIC19.9■□□□□ 0.78
LMNAP02545 AC023632.3-201ENST00000521633 145 ntBASIC19.9■□□□□ 0.78
LMNAP02545 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.9■□□□□ 0.78
LMNAP02545 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LMNAP02545 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.9■□□□□ 0.78
LMNAP02545 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.9■□□□□ 0.78
LMNAP02545 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.9■□□□□ 0.78
LMNAP02545 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNAP02545 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNAP02545 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.9■□□□□ 0.78
LMNAP02545 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LMNAP02545 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LMNAP02545 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNAP02545 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LMNAP02545 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNAP02545 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.9■□□□□ 0.78
LMNAP02545 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNAP02545 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
LMNAP02545 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.89■□□□□ 0.77
LMNAP02545 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LMNAP02545 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LMNAP02545 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LMNAP02545 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LMNAP02545 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LMNAP02545 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
LMNAP02545 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
LMNAP02545 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.89■□□□□ 0.77
LMNAP02545 HMGA1P5-201ENST00000412453 271 ntBASIC19.89■□□□□ 0.77
LMNAP02545 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LMNAP02545 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.89■□□□□ 0.77
LMNAP02545 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LMNAP02545 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.89■□□□□ 0.77
LMNAP02545 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LMNAP02545 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LMNAP02545 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.89■□□□□ 0.77
LMNAP02545 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LMNAP02545 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.89■□□□□ 0.77
LMNAP02545 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.89■□□□□ 0.77
LMNAP02545 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.89■□□□□ 0.77
LMNAP02545 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LMNAP02545 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LMNAP02545 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LMNAP02545 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LMNAP02545 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LMNAP02545 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LMNAP02545 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.88■□□□□ 0.77
LMNAP02545 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LMNAP02545 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LMNAP02545 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
LMNAP02545 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LMNAP02545 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LMNAP02545 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LMNAP02545 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.88■□□□□ 0.77
LMNAP02545 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LMNAP02545 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LMNAP02545 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.88■□□□□ 0.77
LMNAP02545 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.88■□□□□ 0.77
LMNAP02545 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.88■□□□□ 0.77
LMNAP02545 DGCR10-201ENST00000609839 495 ntBASIC19.88■□□□□ 0.77
LMNAP02545 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LMNAP02545 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
LMNAP02545 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.88■□□□□ 0.77
LMNAP02545 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LMNAP02545 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
LMNAP02545 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LMNAP02545 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LMNAP02545 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LMNAP02545 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
LMNAP02545 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMNAP02545 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMNAP02545 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMNAP02545 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMNAP02545 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.87■□□□□ 0.77
LMNAP02545 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LMNAP02545 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMNAP02545 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.87■□□□□ 0.77
LMNAP02545 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LMNAP02545 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LMNAP02545 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMNAP02545 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMNAP02545 TCF3P1-201ENST00000423021 1937 ntBASIC19.87■□□□□ 0.77
LMNAP02545 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMNAP02545 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.87■□□□□ 0.77
LMNAP02545 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.87■□□□□ 0.77
LMNAP02545 YBX1P2-201ENST00000489612 999 ntBASIC19.87■□□□□ 0.77
LMNAP02545 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.87■□□□□ 0.77
LMNAP02545 GPALPP1-207ENST00000611650 899 ntBASIC19.87■□□□□ 0.77
LMNAP02545 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.87■□□□□ 0.77
LMNAP02545 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LMNAP02545 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.87■□□□□ 0.77
LMNAP02545 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LMNAP02545 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMNAP02545 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMNAP02545 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms