Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CLPTM1O96005 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.98■□□□□ 0.47
CLPTM1O96005 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPTM1O96005 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLPTM1O96005 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLPTM1O96005 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CLPTM1O96005 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLPTM1O96005 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLPTM1O96005 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLPTM1O96005 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLPTM1O96005 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLPTM1O96005 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.97■□□□□ 0.47
CLPTM1O96005 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.97■□□□□ 0.47
CLPTM1O96005 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.97■□□□□ 0.47
CLPTM1O96005 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLPTM1O96005 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLPTM1O96005 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.97■□□□□ 0.47
CLPTM1O96005 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.97■□□□□ 0.47
CLPTM1O96005 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.97■□□□□ 0.47
CLPTM1O96005 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLPTM1O96005 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLPTM1O96005 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.97■□□□□ 0.47
CLPTM1O96005 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLPTM1O96005 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLPTM1O96005 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLPTM1O96005 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.97■□□□□ 0.47
CLPTM1O96005 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CLPTM1O96005 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.97■□□□□ 0.47
CLPTM1O96005 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLPTM1O96005 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLPTM1O96005 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
CLPTM1O96005 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.96■□□□□ 0.47
CLPTM1O96005 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.96■□□□□ 0.47
CLPTM1O96005 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.96■□□□□ 0.47
CLPTM1O96005 AC073111.5-205ENST00000641717 521 ntBASIC17.96■□□□□ 0.47
CLPTM1O96005 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.96■□□□□ 0.47
CLPTM1O96005 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPTM1O96005 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CLPTM1O96005 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLPTM1O96005 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLPTM1O96005 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
CLPTM1O96005 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.95■□□□□ 0.46
CLPTM1O96005 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CLPTM1O96005 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.95■□□□□ 0.46
CLPTM1O96005 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.95■□□□□ 0.46
CLPTM1O96005 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CLPTM1O96005 SIRPAP1-201ENST00000448467 1770 ntBASIC17.95■□□□□ 0.46
CLPTM1O96005 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 CDCA4P2-201ENST00000441182 718 ntBASIC17.95■□□□□ 0.46
CLPTM1O96005 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.95■□□□□ 0.46
CLPTM1O96005 AC090192.1-201ENST00000517740 490 ntBASIC17.95■□□□□ 0.46
CLPTM1O96005 DUX4L16-201ENST00000555130 1264 ntBASIC17.95■□□□□ 0.46
CLPTM1O96005 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 KRT16P2-201ENST00000414673 1423 ntBASIC17.95■□□□□ 0.46
CLPTM1O96005 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CLPTM1O96005 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.95■□□□□ 0.46
CLPTM1O96005 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.95■□□□□ 0.46
CLPTM1O96005 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPTM1O96005 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms