Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
TRUB2O95900 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TRUB2O95900 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20■□□□□ 0.79
TRUB2O95900 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRUB2O95900 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
TRUB2O95900 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRUB2O95900 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRUB2O95900 IRX1P1-201ENST00000438849 1838 ntBASIC20■□□□□ 0.79
TRUB2O95900 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRUB2O95900 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRUB2O95900 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRUB2O95900 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRUB2O95900 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRUB2O95900 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
TRUB2O95900 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20■□□□□ 0.79
TRUB2O95900 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20■□□□□ 0.79
TRUB2O95900 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20■□□□□ 0.79
TRUB2O95900 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20■□□□□ 0.79
TRUB2O95900 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRUB2O95900 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20■□□□□ 0.79
TRUB2O95900 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRUB2O95900 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20■□□□□ 0.79
TRUB2O95900 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TRUB2O95900 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20■□□□□ 0.79
TRUB2O95900 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRUB2O95900 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20■□□□□ 0.79
TRUB2O95900 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB2O95900 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB2O95900 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.99■□□□□ 0.79
TRUB2O95900 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB2O95900 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB2O95900 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB2O95900 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB2O95900 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB2O95900 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRUB2O95900 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB2O95900 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
TRUB2O95900 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB2O95900 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB2O95900 FAM207BP-201ENST00000447172 505 ntBASIC19.99■□□□□ 0.79
TRUB2O95900 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.99■□□□□ 0.79
TRUB2O95900 AP000692.2-201ENST00000608391 879 ntBASIC19.99■□□□□ 0.79
TRUB2O95900 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB2O95900 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB2O95900 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB2O95900 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.99■□□□□ 0.79
TRUB2O95900 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRUB2O95900 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB2O95900 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TRUB2O95900 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB2O95900 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.98■□□□□ 0.79
TRUB2O95900 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TRUB2O95900 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.98■□□□□ 0.79
TRUB2O95900 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB2O95900 FP475955.4-201ENST00000623131 1990 ntBASIC19.98■□□□□ 0.79
TRUB2O95900 UNC93B2-201ENST00000285383 730 ntBASIC19.98■□□□□ 0.79
TRUB2O95900 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TRUB2O95900 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRUB2O95900 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.98■□□□□ 0.79
TRUB2O95900 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB2O95900 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB2O95900 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.98■□□□□ 0.79
TRUB2O95900 DGCR10-201ENST00000609839 495 ntBASIC19.98■□□□□ 0.79
TRUB2O95900 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB2O95900 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB2O95900 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.98■□□□□ 0.79
TRUB2O95900 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRUB2O95900 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB2O95900 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB2O95900 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.98■□□□□ 0.79
TRUB2O95900 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.98■□□□□ 0.79
TRUB2O95900 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB2O95900 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.98■□□□□ 0.79
TRUB2O95900 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRUB2O95900 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TRUB2O95900 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.98■□□□□ 0.79
TRUB2O95900 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRUB2O95900 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRUB2O95900 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TRUB2O95900 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.97■□□□□ 0.79
TRUB2O95900 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRUB2O95900 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRUB2O95900 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRUB2O95900 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRUB2O95900 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TRUB2O95900 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRUB2O95900 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.97■□□□□ 0.79
TRUB2O95900 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.97■□□□□ 0.79
TRUB2O95900 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRUB2O95900 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms