Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GGPS1O95749 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GGPS1O95749 TSPY21P-201ENST00000433481 731 ntBASIC21.43■■□□□ 1.02
GGPS1O95749 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
GGPS1O95749 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.43■■□□□ 1.02
GGPS1O95749 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.43■■□□□ 1.02
GGPS1O95749 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GGPS1O95749 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.43■■□□□ 1.02
GGPS1O95749 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.43■■□□□ 1.02
GGPS1O95749 AL441883.1-201ENST00000566170 1045 ntBASIC21.43■■□□□ 1.02
GGPS1O95749 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GGPS1O95749 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.43■■□□□ 1.02
GGPS1O95749 AC140113.3-201ENST00000605663 199 ntBASIC21.43■■□□□ 1.02
GGPS1O95749 AL031432.5-201ENST00000641059 760 ntBASIC21.43■■□□□ 1.02
GGPS1O95749 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GGPS1O95749 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.43■■□□□ 1.02
GGPS1O95749 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.43■■□□□ 1.02
GGPS1O95749 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.43■■□□□ 1.02
GGPS1O95749 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.43■■□□□ 1.02
GGPS1O95749 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
GGPS1O95749 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
GGPS1O95749 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
GGPS1O95749 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GGPS1O95749 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.42■■□□□ 1.02
GGPS1O95749 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
GGPS1O95749 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.42■■□□□ 1.02
GGPS1O95749 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.42■■□□□ 1.02
GGPS1O95749 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GGPS1O95749 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.42■■□□□ 1.02
GGPS1O95749 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.42■■□□□ 1.02
GGPS1O95749 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GGPS1O95749 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.42■■□□□ 1.02
GGPS1O95749 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.42■■□□□ 1.02
GGPS1O95749 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.42■■□□□ 1.02
GGPS1O95749 MIR4674-201ENST00000582457 87 ntBASIC21.42■■□□□ 1.02
GGPS1O95749 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GGPS1O95749 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.42■■□□□ 1.02
GGPS1O95749 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
GGPS1O95749 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
GGPS1O95749 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GGPS1O95749 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GGPS1O95749 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GGPS1O95749 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.41■■□□□ 1.02
GGPS1O95749 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.41■■□□□ 1.02
GGPS1O95749 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
GGPS1O95749 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
GGPS1O95749 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GGPS1O95749 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GGPS1O95749 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.41■■□□□ 1.02
GGPS1O95749 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GGPS1O95749 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.41■■□□□ 1.02
GGPS1O95749 AL031133.1-201ENST00000406807 723 ntBASIC21.41■■□□□ 1.02
GGPS1O95749 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
GGPS1O95749 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GGPS1O95749 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
GGPS1O95749 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
GGPS1O95749 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GGPS1O95749 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
GGPS1O95749 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GGPS1O95749 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.4■■□□□ 1.02
GGPS1O95749 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
GGPS1O95749 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GGPS1O95749 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
GGPS1O95749 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GGPS1O95749 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.4■■□□□ 1.02
GGPS1O95749 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.4■■□□□ 1.02
GGPS1O95749 AC009947.2-201ENST00000444014 672 ntBASIC21.4■■□□□ 1.02
GGPS1O95749 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GGPS1O95749 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.4■■□□□ 1.02
GGPS1O95749 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
GGPS1O95749 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.4■■□□□ 1.02
GGPS1O95749 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GGPS1O95749 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
GGPS1O95749 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.4■■□□□ 1.02
GGPS1O95749 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GGPS1O95749 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
GGPS1O95749 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
GGPS1O95749 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GGPS1O95749 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
GGPS1O95749 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.02
GGPS1O95749 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
GGPS1O95749 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
GGPS1O95749 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
GGPS1O95749 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
GGPS1O95749 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.39■■□□□ 1.02
GGPS1O95749 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GGPS1O95749 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GGPS1O95749 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GGPS1O95749 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GGPS1O95749 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GGPS1O95749 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.39■■□□□ 1.01
GGPS1O95749 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.39■■□□□ 1.01
GGPS1O95749 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GGPS1O95749 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.39■■□□□ 1.01
GGPS1O95749 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.39■■□□□ 1.01
GGPS1O95749 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GGPS1O95749 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GGPS1O95749 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GGPS1O95749 AFG3L1P-217ENST00000557444 2447 ntBASIC21.39■■□□□ 1.01
GGPS1O95749 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms