Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ABCA1O95477 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ABCA1O95477 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ABCA1O95477 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
ABCA1O95477 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ABCA1O95477 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.97■□□□□ 0.15
ABCA1O95477 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ABCA1O95477 PRSS44-201ENST00000515154 1146 ntBASIC15.97■□□□□ 0.15
ABCA1O95477 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.97■□□□□ 0.15
ABCA1O95477 AL031432.5-201ENST00000641059 760 ntBASIC15.97■□□□□ 0.15
ABCA1O95477 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ABCA1O95477 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ABCA1O95477 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ABCA1O95477 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ABCA1O95477 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.97■□□□□ 0.15
ABCA1O95477 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
ABCA1O95477 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ABCA1O95477 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.96■□□□□ 0.15
ABCA1O95477 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.96■□□□□ 0.15
ABCA1O95477 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 AL136038.3-201ENST00000561909 1096 ntBASIC15.96■□□□□ 0.15
ABCA1O95477 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
ABCA1O95477 KRT8P8-201ENST00000434750 1448 ntBASIC15.96■□□□□ 0.15
ABCA1O95477 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ABCA1O95477 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.96■□□□□ 0.15
ABCA1O95477 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCA1O95477 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
ABCA1O95477 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.96■□□□□ 0.14
ABCA1O95477 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ABCA1O95477 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
ABCA1O95477 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ABCA1O95477 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
ABCA1O95477 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ABCA1O95477 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.96■□□□□ 0.14
ABCA1O95477 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.96■□□□□ 0.14
ABCA1O95477 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
ABCA1O95477 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.96■□□□□ 0.14
ABCA1O95477 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ABCA1O95477 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
ABCA1O95477 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCA1O95477 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ABCA1O95477 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCA1O95477 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCA1O95477 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
ABCA1O95477 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ABCA1O95477 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ABCA1O95477 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.95■□□□□ 0.14
ABCA1O95477 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCA1O95477 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ABCA1O95477 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCA1O95477 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
ABCA1O95477 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
ABCA1O95477 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ABCA1O95477 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCA1O95477 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCA1O95477 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCA1O95477 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ABCA1O95477 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCA1O95477 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCA1O95477 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ABCA1O95477 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ABCA1O95477 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCA1O95477 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ABCA1O95477 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
ABCA1O95477 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
ABCA1O95477 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.94■□□□□ 0.14
ABCA1O95477 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
ABCA1O95477 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ABCA1O95477 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
ABCA1O95477 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ABCA1O95477 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
ABCA1O95477 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ABCA1O95477 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.94■□□□□ 0.14
ABCA1O95477 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ABCA1O95477 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.94■□□□□ 0.14
ABCA1O95477 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ABCA1O95477 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.94■□□□□ 0.14
ABCA1O95477 TSPY21P-201ENST00000433481 731 ntBASIC15.94■□□□□ 0.14
ABCA1O95477 TSPY23P-201ENST00000440136 739 ntBASIC15.94■□□□□ 0.14
ABCA1O95477 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.94■□□□□ 0.14
ABCA1O95477 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.94■□□□□ 0.14
ABCA1O95477 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.94■□□□□ 0.14
ABCA1O95477 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ABCA1O95477 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms