Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAPBO95292 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.18■□□□□ 0.66
VAPBO95292 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAPBO95292 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.18■□□□□ 0.66
VAPBO95292 AC128676.1-201ENST00000454392 318 ntBASIC19.18■□□□□ 0.66
VAPBO95292 AC133681.1-201ENST00000465482 601 ntBASIC19.18■□□□□ 0.66
VAPBO95292 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.18■□□□□ 0.66
VAPBO95292 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.18■□□□□ 0.66
VAPBO95292 AC110285.5-201ENST00000611501 352 ntBASIC19.18■□□□□ 0.66
VAPBO95292 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.18■□□□□ 0.66
VAPBO95292 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.18■□□□□ 0.66
VAPBO95292 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAPBO95292 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
VAPBO95292 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAPBO95292 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VAPBO95292 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAPBO95292 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VAPBO95292 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VAPBO95292 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
VAPBO95292 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VAPBO95292 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
VAPBO95292 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VAPBO95292 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAPBO95292 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAPBO95292 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAPBO95292 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAPBO95292 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VAPBO95292 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
VAPBO95292 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.17■□□□□ 0.66
VAPBO95292 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.17■□□□□ 0.66
VAPBO95292 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.17■□□□□ 0.66
VAPBO95292 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.17■□□□□ 0.66
VAPBO95292 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.17■□□□□ 0.66
VAPBO95292 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.17■□□□□ 0.66
VAPBO95292 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.17■□□□□ 0.66
VAPBO95292 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.17■□□□□ 0.66
VAPBO95292 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAPBO95292 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAPBO95292 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.17■□□□□ 0.66
VAPBO95292 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.17■□□□□ 0.66
VAPBO95292 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAPBO95292 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAPBO95292 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAPBO95292 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VAPBO95292 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
VAPBO95292 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.16■□□□□ 0.66
VAPBO95292 POU5F1P3-201ENST00000428824 1078 ntBASIC19.16■□□□□ 0.66
VAPBO95292 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.16■□□□□ 0.66
VAPBO95292 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.16■□□□□ 0.66
VAPBO95292 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.16■□□□□ 0.66
VAPBO95292 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
VAPBO95292 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VAPBO95292 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VAPBO95292 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VAPBO95292 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VAPBO95292 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VAPBO95292 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VAPBO95292 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.15■□□□□ 0.66
VAPBO95292 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.15■□□□□ 0.66
VAPBO95292 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
VAPBO95292 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.15■□□□□ 0.66
VAPBO95292 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
VAPBO95292 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VAPBO95292 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VAPBO95292 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VAPBO95292 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.15■□□□□ 0.66
VAPBO95292 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.15■□□□□ 0.66
VAPBO95292 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VAPBO95292 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.14■□□□□ 0.66
VAPBO95292 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
VAPBO95292 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.66
VAPBO95292 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
VAPBO95292 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VAPBO95292 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VAPBO95292 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VAPBO95292 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VAPBO95292 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VAPBO95292 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VAPBO95292 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VAPBO95292 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.14■□□□□ 0.65
VAPBO95292 TSPY21P-201ENST00000433481 731 ntBASIC19.14■□□□□ 0.65
VAPBO95292 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
VAPBO95292 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.14■□□□□ 0.65
VAPBO95292 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms