Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.25■□□□□ 0.51
SNRNP200O75643 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SNRNP200O75643 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SNRNP200O75643 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.25■□□□□ 0.51
SNRNP200O75643 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.25■□□□□ 0.51
SNRNP200O75643 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNRNP200O75643 TSPY14P-201ENST00000303979 915 ntBASIC18.25■□□□□ 0.51
SNRNP200O75643 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.25■□□□□ 0.51
SNRNP200O75643 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.25■□□□□ 0.51
SNRNP200O75643 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
SNRNP200O75643 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNRNP200O75643 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNRNP200O75643 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.24■□□□□ 0.51
SNRNP200O75643 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SNRNP200O75643 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.24■□□□□ 0.51
SNRNP200O75643 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNRNP200O75643 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
SNRNP200O75643 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SNRNP200O75643 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNRNP200O75643 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.24■□□□□ 0.51
SNRNP200O75643 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.24■□□□□ 0.51
SNRNP200O75643 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNRNP200O75643 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNRNP200O75643 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SNRNP200O75643 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
SNRNP200O75643 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNRNP200O75643 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNRNP200O75643 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNRNP200O75643 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNRNP200O75643 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.24■□□□□ 0.51
SNRNP200O75643 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SNRNP200O75643 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.24■□□□□ 0.51
SNRNP200O75643 AC073508.3-201ENST00000619697 1419 ntBASIC18.24■□□□□ 0.51
SNRNP200O75643 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNRNP200O75643 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SNRNP200O75643 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.23■□□□□ 0.51
SNRNP200O75643 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNRNP200O75643 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.23■□□□□ 0.51
SNRNP200O75643 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SNRNP200O75643 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.23■□□□□ 0.51
SNRNP200O75643 NAPSB-206ENST00000562112 1266 ntBASIC18.23■□□□□ 0.51
SNRNP200O75643 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNRNP200O75643 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNRNP200O75643 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNRNP200O75643 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SNRNP200O75643 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.23■□□□□ 0.51
SNRNP200O75643 TERF1P1-201ENST00000311003 1181 ntBASIC18.23■□□□□ 0.51
SNRNP200O75643 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNRNP200O75643 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.23■□□□□ 0.51
SNRNP200O75643 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.23■□□□□ 0.51
SNRNP200O75643 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.23■□□□□ 0.51
SNRNP200O75643 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SNRNP200O75643 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNRNP200O75643 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SNRNP200O75643 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.23■□□□□ 0.51
SNRNP200O75643 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNRNP200O75643 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SNRNP200O75643 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.22■□□□□ 0.51
SNRNP200O75643 MTMR9LP-203ENST00000426597 1545 ntBASIC18.22■□□□□ 0.51
SNRNP200O75643 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.22■□□□□ 0.51
SNRNP200O75643 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 AC128688.1-201ENST00000487626 519 ntBASIC18.22■□□□□ 0.51
SNRNP200O75643 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 IRX1P1-201ENST00000438849 1838 ntBASIC18.22■□□□□ 0.51
SNRNP200O75643 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SNRNP200O75643 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.22■□□□□ 0.51
SNRNP200O75643 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNRNP200O75643 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.22■□□□□ 0.51
SNRNP200O75643 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.22■□□□□ 0.51
SNRNP200O75643 AC009947.2-201ENST00000444014 672 ntBASIC18.22■□□□□ 0.51
SNRNP200O75643 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.22■□□□□ 0.51
SNRNP200O75643 AC092865.7-201ENST00000641832 219 ntBASIC18.22■□□□□ 0.51
SNRNP200O75643 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNRNP200O75643 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.21■□□□□ 0.51
SNRNP200O75643 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNRNP200O75643 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms