Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
GPC4O75487 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.11■□□□□ 0.65
GPC4O75487 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 AC098590.1-201ENST00000468126 897 ntBASIC19.11■□□□□ 0.65
GPC4O75487 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
GPC4O75487 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
GPC4O75487 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.11■□□□□ 0.65
GPC4O75487 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
GPC4O75487 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GPC4O75487 AC093503.3-201ENST00000624917 2352 ntBASIC19.11■□□□□ 0.65
GPC4O75487 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.11■□□□□ 0.65
GPC4O75487 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.11■□□□□ 0.65
GPC4O75487 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.1■□□□□ 0.65
GPC4O75487 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC4O75487 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC4O75487 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC4O75487 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
GPC4O75487 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
GPC4O75487 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.1■□□□□ 0.65
GPC4O75487 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC4O75487 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.1■□□□□ 0.65
GPC4O75487 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
GPC4O75487 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
GPC4O75487 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.1■□□□□ 0.65
GPC4O75487 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.1■□□□□ 0.65
GPC4O75487 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.1■□□□□ 0.65
GPC4O75487 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.1■□□□□ 0.65
GPC4O75487 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GPC4O75487 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC4O75487 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.1■□□□□ 0.65
GPC4O75487 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC4O75487 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC4O75487 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC4O75487 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GPC4O75487 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC4O75487 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC4O75487 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC4O75487 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GPC4O75487 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
GPC4O75487 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GPC4O75487 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
GPC4O75487 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GPC4O75487 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
GPC4O75487 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GPC4O75487 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GPC4O75487 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GPC4O75487 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GPC4O75487 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GPC4O75487 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GPC4O75487 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GPC4O75487 GCSHP5-201ENST00000443090 522 ntBASIC19.09■□□□□ 0.65
GPC4O75487 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.09■□□□□ 0.65
GPC4O75487 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
GPC4O75487 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.09■□□□□ 0.65
GPC4O75487 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.09■□□□□ 0.65
GPC4O75487 C1QL1P1-201ENST00000568105 661 ntBASIC19.09■□□□□ 0.65
GPC4O75487 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GPC4O75487 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
GPC4O75487 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GPC4O75487 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.09■□□□□ 0.65
GPC4O75487 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GPC4O75487 LINC01465-201ENST00000408887 1940 ntBASIC19.09■□□□□ 0.65
GPC4O75487 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.09■□□□□ 0.65
GPC4O75487 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.09■□□□□ 0.65
GPC4O75487 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
GPC4O75487 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
GPC4O75487 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GPC4O75487 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.09■□□□□ 0.65
GPC4O75487 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.09■□□□□ 0.65
GPC4O75487 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GPC4O75487 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.09■□□□□ 0.65
GPC4O75487 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
GPC4O75487 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
GPC4O75487 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GPC4O75487 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.08■□□□□ 0.65
GPC4O75487 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
GPC4O75487 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.08■□□□□ 0.65
GPC4O75487 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
GPC4O75487 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
GPC4O75487 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.08■□□□□ 0.65
GPC4O75487 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
GPC4O75487 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
GPC4O75487 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
GPC4O75487 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC4O75487 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.08■□□□□ 0.64
GPC4O75487 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.08■□□□□ 0.64
GPC4O75487 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms