Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 Z99916.2-201ENST00000604037 246 ntBASIC17.01■□□□□ 0.31
TRAF3IP2O43734 AL049637.2-201ENST00000641778 930 ntBASIC17.01■□□□□ 0.31
TRAF3IP2O43734 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 RNF165-205ENST00000588679 2904 ntBASIC17.01■□□□□ 0.31
TRAF3IP2O43734 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP2O43734 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRAF3IP2O43734 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17■□□□□ 0.31
TRAF3IP2O43734 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
TRAF3IP2O43734 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17■□□□□ 0.31
TRAF3IP2O43734 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRAF3IP2O43734 MESTP1-201ENST00000404287 994 ntBASIC17■□□□□ 0.31
TRAF3IP2O43734 KRT8P11-201ENST00000409686 1436 ntBASIC17■□□□□ 0.31
TRAF3IP2O43734 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17■□□□□ 0.31
TRAF3IP2O43734 AC008040.2-201ENST00000461049 708 ntBASIC17■□□□□ 0.31
TRAF3IP2O43734 B3GAT3P1-201ENST00000471720 806 ntBASIC17■□□□□ 0.31
TRAF3IP2O43734 AC011506.1-201ENST00000474329 610 ntBASIC17■□□□□ 0.31
TRAF3IP2O43734 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 AC008550.1-201ENST00000511500 884 ntBASIC17■□□□□ 0.31
TRAF3IP2O43734 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17■□□□□ 0.31
TRAF3IP2O43734 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17■□□□□ 0.31
TRAF3IP2O43734 MIR6786-201ENST00000616843 113 ntBASIC17■□□□□ 0.31
TRAF3IP2O43734 AC011298.2-201ENST00000617989 482 ntBASIC17■□□□□ 0.31
TRAF3IP2O43734 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17■□□□□ 0.31
TRAF3IP2O43734 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP2O43734 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 AP001412.1-201ENST00000608405 714 ntBASIC16.99■□□□□ 0.31
TRAF3IP2O43734 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF3IP2O43734 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms