Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MSI1O43347 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MSI1O43347 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MSI1O43347 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MSI1O43347 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.82■□□□□ 0.76
MSI1O43347 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
MSI1O43347 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MSI1O43347 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.82■□□□□ 0.76
MSI1O43347 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MSI1O43347 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MSI1O43347 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MSI1O43347 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MSI1O43347 ECEL1P2-202ENST00000465689 757 ntBASIC19.82■□□□□ 0.76
MSI1O43347 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.82■□□□□ 0.76
MSI1O43347 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.82■□□□□ 0.76
MSI1O43347 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MSI1O43347 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MSI1O43347 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MSI1O43347 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MSI1O43347 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MSI1O43347 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MSI1O43347 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
MSI1O43347 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MSI1O43347 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MSI1O43347 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MSI1O43347 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MSI1O43347 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MSI1O43347 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MSI1O43347 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MSI1O43347 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MSI1O43347 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MSI1O43347 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.81■□□□□ 0.76
MSI1O43347 EGLN1P1-201ENST00000531623 762 ntBASIC19.81■□□□□ 0.76
MSI1O43347 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.81■□□□□ 0.76
MSI1O43347 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.81■□□□□ 0.76
MSI1O43347 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.81■□□□□ 0.76
MSI1O43347 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MSI1O43347 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.81■□□□□ 0.76
MSI1O43347 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.81■□□□□ 0.76
MSI1O43347 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
MSI1O43347 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MSI1O43347 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MSI1O43347 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
MSI1O43347 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MSI1O43347 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
MSI1O43347 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MSI1O43347 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.81■□□□□ 0.76
MSI1O43347 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSI1O43347 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
MSI1O43347 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSI1O43347 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSI1O43347 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.8■□□□□ 0.76
MSI1O43347 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.8■□□□□ 0.76
MSI1O43347 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.8■□□□□ 0.76
MSI1O43347 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
MSI1O43347 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.8■□□□□ 0.76
MSI1O43347 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
MSI1O43347 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSI1O43347 AC141586.3-201ENST00000562166 1838 ntBASIC19.8■□□□□ 0.76
MSI1O43347 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSI1O43347 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSI1O43347 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSI1O43347 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSI1O43347 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
MSI1O43347 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSI1O43347 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.8■□□□□ 0.76
MSI1O43347 AC005332.7-201ENST00000614046 2005 ntBASIC19.8■□□□□ 0.76
MSI1O43347 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.79■□□□□ 0.76
MSI1O43347 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSI1O43347 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
MSI1O43347 KRT18P22-201ENST00000402024 1347 ntBASIC19.79■□□□□ 0.76
MSI1O43347 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MSI1O43347 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSI1O43347 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.79■□□□□ 0.76
MSI1O43347 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MSI1O43347 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSI1O43347 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
MSI1O43347 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSI1O43347 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MSI1O43347 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
MSI1O43347 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSI1O43347 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MSI1O43347 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.79■□□□□ 0.76
MSI1O43347 FAM87A-204ENST00000613235 858 ntBASIC19.79■□□□□ 0.76
MSI1O43347 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSI1O43347 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSI1O43347 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.79■□□□□ 0.76
MSI1O43347 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
MSI1O43347 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.79■□□□□ 0.76
MSI1O43347 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.79■□□□□ 0.76
MSI1O43347 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.78■□□□□ 0.76
MSI1O43347 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.78■□□□□ 0.76
MSI1O43347 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
MSI1O43347 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MSI1O43347 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MSI1O43347 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MSI1O43347 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MSI1O43347 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MSI1O43347 SLC25A1P2-201ENST00000430693 912 ntBASIC19.78■□□□□ 0.76
MSI1O43347 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms