Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.69■□□□□ 0.9
CEP290O15078 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.69■□□□□ 0.9
CEP290O15078 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CEP290O15078 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.69■□□□□ 0.9
CEP290O15078 AL049840.3-201ENST00000602669 611 ntBASIC20.69■□□□□ 0.9
CEP290O15078 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.69■□□□□ 0.9
CEP290O15078 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CEP290O15078 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CEP290O15078 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CEP290O15078 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CEP290O15078 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CEP290O15078 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CEP290O15078 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CEP290O15078 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CEP290O15078 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.69■□□□□ 0.9
CEP290O15078 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CEP290O15078 SART3-203ENST00000546611 1184 ntBASIC20.69■□□□□ 0.9
CEP290O15078 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CEP290O15078 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CEP290O15078 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CEP290O15078 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CEP290O15078 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CEP290O15078 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.68■□□□□ 0.9
CEP290O15078 MIR3917-201ENST00000580971 93 ntBASIC20.68■□□□□ 0.9
CEP290O15078 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CEP290O15078 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CEP290O15078 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CEP290O15078 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CEP290O15078 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CEP290O15078 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CEP290O15078 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CEP290O15078 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.68■□□□□ 0.9
CEP290O15078 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CEP290O15078 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CEP290O15078 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CEP290O15078 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CEP290O15078 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.68■□□□□ 0.9
CEP290O15078 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.68■□□□□ 0.9
CEP290O15078 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.68■□□□□ 0.9
CEP290O15078 AL591424.1-201ENST00000442569 1213 ntBASIC20.68■□□□□ 0.9
CEP290O15078 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.68■□□□□ 0.9
CEP290O15078 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CEP290O15078 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CEP290O15078 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.68■□□□□ 0.9
CEP290O15078 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CEP290O15078 AC104109.2-201ENST00000602919 1418 ntBASIC20.68■□□□□ 0.9
CEP290O15078 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CEP290O15078 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CEP290O15078 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CEP290O15078 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CEP290O15078 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CEP290O15078 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.67■□□□□ 0.9
CEP290O15078 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.67■□□□□ 0.9
CEP290O15078 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CEP290O15078 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CEP290O15078 SMG8-203ENST00000578922 2178 ntBASIC20.67■□□□□ 0.9
CEP290O15078 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CEP290O15078 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.67■□□□□ 0.9
CEP290O15078 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CEP290O15078 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.67■□□□□ 0.9
CEP290O15078 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
CEP290O15078 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.67■□□□□ 0.9
CEP290O15078 FP700111.2-201ENST00000619190 1892 ntBASIC20.67■□□□□ 0.9
CEP290O15078 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.67■□□□□ 0.9
CEP290O15078 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CEP290O15078 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CEP290O15078 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.66■□□□□ 0.9
CEP290O15078 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CEP290O15078 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CEP290O15078 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CEP290O15078 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.66■□□□□ 0.9
CEP290O15078 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CEP290O15078 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.66■□□□□ 0.9
CEP290O15078 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.66■□□□□ 0.9
CEP290O15078 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CEP290O15078 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CEP290O15078 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CEP290O15078 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CEP290O15078 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CEP290O15078 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CEP290O15078 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CEP290O15078 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CEP290O15078 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CEP290O15078 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CEP290O15078 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CEP290O15078 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CEP290O15078 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CEP290O15078 VENTXP7-201ENST00000475503 772 ntBASIC20.66■□□□□ 0.9
CEP290O15078 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CEP290O15078 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.66■□□□□ 0.9
CEP290O15078 AL592071.1-201ENST00000611956 408 ntBASIC20.66■□□□□ 0.9
CEP290O15078 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CEP290O15078 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.66■□□□□ 0.9
CEP290O15078 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.66■□□□□ 0.9
CEP290O15078 FEM1AP1-201ENST00000431297 1995 ntBASIC20.66■□□□□ 0.9
CEP290O15078 PLK5-205ENST00000642079 1969 ntBASIC20.66■□□□□ 0.9
CEP290O15078 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CEP290O15078 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CEP290O15078 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CEP290O15078 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms