Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHDO14521 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SDHDO14521 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
SDHDO14521 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SDHDO14521 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SDHDO14521 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHDO14521 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHDO14521 PCDHB18P-201ENST00000524813 2368 ntBASIC18.44■□□□□ 0.54
SDHDO14521 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHDO14521 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SDHDO14521 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.44■□□□□ 0.54
SDHDO14521 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SDHDO14521 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SDHDO14521 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.44■□□□□ 0.54
SDHDO14521 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SDHDO14521 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHDO14521 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHDO14521 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHDO14521 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.44■□□□□ 0.54
SDHDO14521 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHDO14521 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.44■□□□□ 0.54
SDHDO14521 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHDO14521 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHDO14521 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SDHDO14521 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SDHDO14521 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
SDHDO14521 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHDO14521 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.43■□□□□ 0.54
SDHDO14521 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.43■□□□□ 0.54
SDHDO14521 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SDHDO14521 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SDHDO14521 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHDO14521 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SDHDO14521 CROCCP5-201ENST00000436658 830 ntBASIC18.43■□□□□ 0.54
SDHDO14521 AC026185.1-201ENST00000445748 174 ntBASIC18.43■□□□□ 0.54
SDHDO14521 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
SDHDO14521 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.43■□□□□ 0.54
SDHDO14521 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.43■□□□□ 0.54
SDHDO14521 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.43■□□□□ 0.54
SDHDO14521 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.43■□□□□ 0.54
SDHDO14521 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.43■□□□□ 0.54
SDHDO14521 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.43■□□□□ 0.54
SDHDO14521 MIR5787-201ENST00000611784 55 ntBASIC18.43■□□□□ 0.54
SDHDO14521 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.43■□□□□ 0.54
SDHDO14521 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SDHDO14521 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHDO14521 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SDHDO14521 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SDHDO14521 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHDO14521 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHDO14521 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHDO14521 AC068880.1-201ENST00000507289 2297 ntBASIC18.43■□□□□ 0.54
SDHDO14521 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHDO14521 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SDHDO14521 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SDHDO14521 AC092368.3-202ENST00000574180 1591 ntBASIC18.42■□□□□ 0.54
SDHDO14521 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.42■□□□□ 0.54
SDHDO14521 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.42■□□□□ 0.54
SDHDO14521 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SDHDO14521 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHDO14521 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.42■□□□□ 0.54
SDHDO14521 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.42■□□□□ 0.54
SDHDO14521 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHDO14521 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHDO14521 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SDHDO14521 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SDHDO14521 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SDHDO14521 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.42■□□□□ 0.54
SDHDO14521 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.42■□□□□ 0.54
SDHDO14521 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.42■□□□□ 0.54
SDHDO14521 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.42■□□□□ 0.54
SDHDO14521 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.42■□□□□ 0.54
SDHDO14521 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.42■□□□□ 0.54
SDHDO14521 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHDO14521 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHDO14521 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHDO14521 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHDO14521 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHDO14521 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SDHDO14521 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHDO14521 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SDHDO14521 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SDHDO14521 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.41■□□□□ 0.54
SDHDO14521 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHDO14521 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHDO14521 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHDO14521 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHDO14521 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHDO14521 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SDHDO14521 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.41■□□□□ 0.54
SDHDO14521 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHDO14521 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.41■□□□□ 0.54
SDHDO14521 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.41■□□□□ 0.54
SDHDO14521 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.41■□□□□ 0.54
SDHDO14521 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
SDHDO14521 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHDO14521 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHDO14521 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SDHDO14521 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHDO14521 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms