Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
E2F3O00716 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
E2F3O00716 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
E2F3O00716 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
E2F3O00716 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
E2F3O00716 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.61■□□□□ 0.57
E2F3O00716 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
E2F3O00716 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
E2F3O00716 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.61■□□□□ 0.57
E2F3O00716 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
E2F3O00716 AL031598.1-201ENST00000561511 1773 ntBASIC18.61■□□□□ 0.57
E2F3O00716 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
E2F3O00716 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
E2F3O00716 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.61■□□□□ 0.57
E2F3O00716 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
E2F3O00716 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
E2F3O00716 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
E2F3O00716 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
E2F3O00716 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.61■□□□□ 0.57
E2F3O00716 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.61■□□□□ 0.57
E2F3O00716 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
E2F3O00716 AL160286.2-201ENST00000567150 934 ntBASIC18.61■□□□□ 0.57
E2F3O00716 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.61■□□□□ 0.57
E2F3O00716 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
E2F3O00716 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.61■□□□□ 0.57
E2F3O00716 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
E2F3O00716 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
E2F3O00716 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
E2F3O00716 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
E2F3O00716 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
E2F3O00716 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
E2F3O00716 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.6■□□□□ 0.57
E2F3O00716 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.6■□□□□ 0.57
E2F3O00716 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.6■□□□□ 0.57
E2F3O00716 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
E2F3O00716 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
E2F3O00716 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
E2F3O00716 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
E2F3O00716 AC093525.10-201ENST00000625130 1569 ntBASIC18.6■□□□□ 0.57
E2F3O00716 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.6■□□□□ 0.57
E2F3O00716 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
E2F3O00716 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
E2F3O00716 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.6■□□□□ 0.57
E2F3O00716 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
E2F3O00716 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
E2F3O00716 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
E2F3O00716 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.6■□□□□ 0.57
E2F3O00716 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.6■□□□□ 0.57
E2F3O00716 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
E2F3O00716 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
E2F3O00716 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
E2F3O00716 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.6■□□□□ 0.57
E2F3O00716 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
E2F3O00716 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
E2F3O00716 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
E2F3O00716 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.59■□□□□ 0.57
E2F3O00716 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
E2F3O00716 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.59■□□□□ 0.57
E2F3O00716 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
E2F3O00716 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
E2F3O00716 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.59■□□□□ 0.57
E2F3O00716 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.59■□□□□ 0.57
E2F3O00716 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.59■□□□□ 0.57
E2F3O00716 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.59■□□□□ 0.57
E2F3O00716 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
E2F3O00716 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
E2F3O00716 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
E2F3O00716 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.59■□□□□ 0.57
E2F3O00716 ECEL1P3-201ENST00000427961 737 ntBASIC18.59■□□□□ 0.57
E2F3O00716 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
E2F3O00716 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.59■□□□□ 0.57
E2F3O00716 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
E2F3O00716 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.59■□□□□ 0.57
E2F3O00716 AL023875.1-201ENST00000640777 796 ntBASIC18.59■□□□□ 0.57
E2F3O00716 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.59■□□□□ 0.57
E2F3O00716 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
E2F3O00716 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.59■□□□□ 0.57
E2F3O00716 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.59■□□□□ 0.57
E2F3O00716 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
E2F3O00716 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
E2F3O00716 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
E2F3O00716 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
E2F3O00716 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
E2F3O00716 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
E2F3O00716 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
E2F3O00716 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.58■□□□□ 0.57
E2F3O00716 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
E2F3O00716 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
E2F3O00716 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
E2F3O00716 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.58■□□□□ 0.57
E2F3O00716 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
E2F3O00716 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
E2F3O00716 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.58■□□□□ 0.57
E2F3O00716 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
E2F3O00716 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.58■□□□□ 0.56
E2F3O00716 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
E2F3O00716 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.58■□□□□ 0.56
E2F3O00716 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.58■□□□□ 0.56
E2F3O00716 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.58■□□□□ 0.56
E2F3O00716 TSPY21P-201ENST00000433481 731 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms