Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXN3O00409 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN3O00409 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN3O00409 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXN3O00409 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN3O00409 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
FOXN3O00409 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXN3O00409 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
FOXN3O00409 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.42■□□□□ 0.86
FOXN3O00409 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN3O00409 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN3O00409 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.42■□□□□ 0.86
FOXN3O00409 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN3O00409 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN3O00409 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.42■□□□□ 0.86
FOXN3O00409 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
FOXN3O00409 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN3O00409 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN3O00409 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
FOXN3O00409 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN3O00409 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
FOXN3O00409 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.42■□□□□ 0.86
FOXN3O00409 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN3O00409 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.42■□□□□ 0.86
FOXN3O00409 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN3O00409 AF186192.3-201ENST00000583427 947 ntBASIC20.42■□□□□ 0.86
FOXN3O00409 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.42■□□□□ 0.86
FOXN3O00409 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN3O00409 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN3O00409 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN3O00409 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.42■□□□□ 0.86
FOXN3O00409 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN3O00409 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN3O00409 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
FOXN3O00409 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN3O00409 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXN3O00409 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN3O00409 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.41■□□□□ 0.86
FOXN3O00409 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
FOXN3O00409 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN3O00409 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN3O00409 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN3O00409 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN3O00409 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN3O00409 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
FOXN3O00409 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN3O00409 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN3O00409 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.41■□□□□ 0.86
FOXN3O00409 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
FOXN3O00409 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN3O00409 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.41■□□□□ 0.86
FOXN3O00409 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN3O00409 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.41■□□□□ 0.86
FOXN3O00409 RARRES2P10-201ENST00000564312 460 ntBASIC20.41■□□□□ 0.86
FOXN3O00409 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.41■□□□□ 0.86
FOXN3O00409 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN3O00409 FAM197Y4-202ENST00000622692 608 ntBASIC20.41■□□□□ 0.86
FOXN3O00409 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.41■□□□□ 0.86
FOXN3O00409 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.41■□□□□ 0.86
FOXN3O00409 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
FOXN3O00409 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN3O00409 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN3O00409 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN3O00409 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.41■□□□□ 0.86
FOXN3O00409 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.41■□□□□ 0.86
FOXN3O00409 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN3O00409 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FOXN3O00409 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.41■□□□□ 0.86
FOXN3O00409 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
FOXN3O00409 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.4■□□□□ 0.86
FOXN3O00409 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXN3O00409 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
FOXN3O00409 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXN3O00409 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXN3O00409 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXN3O00409 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXN3O00409 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FOXN3O00409 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXN3O00409 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
FOXN3O00409 KRT8P11-201ENST00000409686 1436 ntBASIC20.4■□□□□ 0.86
FOXN3O00409 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.4■□□□□ 0.86
FOXN3O00409 AC098590.1-201ENST00000468126 897 ntBASIC20.4■□□□□ 0.86
FOXN3O00409 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FOXN3O00409 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.4■□□□□ 0.86
FOXN3O00409 AL031598.1-201ENST00000561511 1773 ntBASIC20.4■□□□□ 0.86
FOXN3O00409 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.4■□□□□ 0.86
FOXN3O00409 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXN3O00409 CR392000.1-201ENST00000624770 1228 ntBASIC20.4■□□□□ 0.86
FOXN3O00409 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXN3O00409 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXN3O00409 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXN3O00409 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.39■□□□□ 0.86
FOXN3O00409 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXN3O00409 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.39■□□□□ 0.86
FOXN3O00409 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
FOXN3O00409 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
FOXN3O00409 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.39■□□□□ 0.86
FOXN3O00409 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXN3O00409 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.39■□□□□ 0.86
FOXN3O00409 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms