Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TLR4O00206 KRT8P45-201ENST00000414328 1447 ntBASIC18.91■□□□□ 0.62
TLR4O00206 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TLR4O00206 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TLR4O00206 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.91■□□□□ 0.62
TLR4O00206 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.9■□□□□ 0.62
TLR4O00206 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.9■□□□□ 0.62
TLR4O00206 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.9■□□□□ 0.62
TLR4O00206 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.9■□□□□ 0.62
TLR4O00206 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TLR4O00206 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TLR4O00206 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TLR4O00206 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TLR4O00206 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.9■□□□□ 0.62
TLR4O00206 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TLR4O00206 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.9■□□□□ 0.62
TLR4O00206 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TLR4O00206 AL441883.1-201ENST00000566170 1045 ntBASIC18.9■□□□□ 0.62
TLR4O00206 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TLR4O00206 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.9■□□□□ 0.62
TLR4O00206 AP000550.4-202ENST00000639755 178 ntBASIC18.9■□□□□ 0.62
TLR4O00206 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TLR4O00206 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TLR4O00206 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TLR4O00206 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TLR4O00206 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TLR4O00206 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.89■□□□□ 0.62
TLR4O00206 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TLR4O00206 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.89■□□□□ 0.61
TLR4O00206 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TLR4O00206 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.89■□□□□ 0.61
TLR4O00206 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.89■□□□□ 0.61
TLR4O00206 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.89■□□□□ 0.61
TLR4O00206 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.89■□□□□ 0.61
TLR4O00206 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.89■□□□□ 0.61
TLR4O00206 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.89■□□□□ 0.61
TLR4O00206 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TLR4O00206 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.89■□□□□ 0.61
TLR4O00206 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TLR4O00206 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.89■□□□□ 0.61
TLR4O00206 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
TLR4O00206 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.89■□□□□ 0.61
TLR4O00206 AL121956.5-201ENST00000625261 221 ntBASIC18.89■□□□□ 0.61
TLR4O00206 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.89■□□□□ 0.61
TLR4O00206 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.89■□□□□ 0.61
TLR4O00206 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TLR4O00206 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TLR4O00206 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TLR4O00206 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TLR4O00206 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TLR4O00206 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TLR4O00206 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TLR4O00206 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.89■□□□□ 0.61
TLR4O00206 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TLR4O00206 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TLR4O00206 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TLR4O00206 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.88■□□□□ 0.61
TLR4O00206 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TLR4O00206 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TLR4O00206 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TLR4O00206 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TLR4O00206 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.88■□□□□ 0.61
TLR4O00206 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR4O00206 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.88■□□□□ 0.61
TLR4O00206 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TLR4O00206 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TLR4O00206 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TLR4O00206 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR4O00206 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TLR4O00206 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR4O00206 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.88■□□□□ 0.61
TLR4O00206 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR4O00206 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.88■□□□□ 0.61
TLR4O00206 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR4O00206 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TLR4O00206 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR4O00206 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TLR4O00206 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TLR4O00206 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TLR4O00206 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TLR4O00206 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR4O00206 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TLR4O00206 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.88■□□□□ 0.61
TLR4O00206 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TLR4O00206 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TLR4O00206 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TLR4O00206 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TLR4O00206 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TLR4O00206 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.87■□□□□ 0.61
TLR4O00206 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TLR4O00206 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.87■□□□□ 0.61
TLR4O00206 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TLR4O00206 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.87■□□□□ 0.61
TLR4O00206 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TLR4O00206 AL359075.1-203ENST00000462729 1002 ntBASIC18.87■□□□□ 0.61
TLR4O00206 FAM86EP-206ENST00000510506 987 ntBASIC18.87■□□□□ 0.61
TLR4O00206 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.87■□□□□ 0.61
TLR4O00206 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.87■□□□□ 0.61
TLR4O00206 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TLR4O00206 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms