Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.67■□□□□ 0.58
C4orf47A7E2U8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 MIR4674-201ENST00000582457 87 ntBASIC18.66■□□□□ 0.58
C4orf47A7E2U8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
C4orf47A7E2U8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 TSPY19P-201ENST00000418461 509 ntBASIC18.65■□□□□ 0.58
C4orf47A7E2U8 TSPY18P-201ENST00000441642 509 ntBASIC18.65■□□□□ 0.58
C4orf47A7E2U8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 AC079781.3-201ENST00000449110 356 ntBASIC18.65■□□□□ 0.58
C4orf47A7E2U8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 AC091304.2-201ENST00000564639 760 ntBASIC18.65■□□□□ 0.58
C4orf47A7E2U8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C4orf47A7E2U8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.64■□□□□ 0.58
C4orf47A7E2U8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
C4orf47A7E2U8 FEM1AP1-201ENST00000431297 1995 ntBASIC18.64■□□□□ 0.58
C4orf47A7E2U8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
C4orf47A7E2U8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
C4orf47A7E2U8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 KRT8P26-201ENST00000534154 1276 ntBASIC18.64■□□□□ 0.57
C4orf47A7E2U8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 LINC01711-201ENST00000598340 967 ntBASIC18.64■□□□□ 0.57
C4orf47A7E2U8 AL121772.3-201ENST00000610840 674 ntBASIC18.64■□□□□ 0.57
C4orf47A7E2U8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 AC007225.1-201ENST00000566331 1836 ntBASIC18.64■□□□□ 0.57
C4orf47A7E2U8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 KRT18P1-202ENST00000452408 1331 ntBASIC18.64■□□□□ 0.57
C4orf47A7E2U8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 SMG8-203ENST00000578922 2178 ntBASIC18.64■□□□□ 0.57
C4orf47A7E2U8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C4orf47A7E2U8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf47A7E2U8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms