Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC104187.1-201ENST00000607510 612 ntBASIC13.57□□□□□ -0.24
LINC01549A6NIU2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 SIRPAP1-201ENST00000448467 1770 ntBASIC13.57□□□□□ -0.24
LINC01549A6NIU2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01549A6NIU2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 AL591742.1-201ENST00000604433 565 ntBASIC13.56□□□□□ -0.24
LINC01549A6NIU2 AC100791.3-201ENST00000617619 330 ntBASIC13.56□□□□□ -0.24
LINC01549A6NIU2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LINC01549A6NIU2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 EDA-201ENST00000338901 1233 ntBASIC13.55□□□□□ -0.24
LINC01549A6NIU2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 AC083906.6-201ENST00000641366 219 ntBASIC13.55□□□□□ -0.24
LINC01549A6NIU2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC01549A6NIU2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms