Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM238LA0A1B0GVL6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 KRT18P24-201ENST00000344739 1156 ntBASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 FLJ38576-201ENST00000623820 2459 ntBASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM238LA0A1B0GVL6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 AC006333.2-201ENST00000607957 2099 ntBASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM238LA0A1B0GVL6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM238LA0A1B0GVL6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM238LA0A1B0GVL6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM238LA0A1B0GVL6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
TMEM238LA0A1B0GVL6 AC012317.2-201ENST00000623305 2251 ntBASIC13.34□□□□□ -0.27
TMEM238LA0A1B0GVL6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM238LA0A1B0GVL6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM238LA0A1B0GVL6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM238LA0A1B0GVL6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM238LA0A1B0GVL6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM238LA0A1B0GVL6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM238LA0A1B0GVL6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TMEM238LA0A1B0GVL6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM238LA0A1B0GVL6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM238LA0A1B0GVL6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM238LA0A1B0GVL6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms