Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 RAP2CP1-201ENST00000605103 478 ntBASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-4A0A0B4J246 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 GPX1P1-201ENST00000388829 606 ntBASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 AC073210.2-201ENST00000430369 194 ntBASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 AC083906.2-201ENST00000511578 360 ntBASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 MIR4758-201ENST00000577688 71 ntBASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV8-4A0A0B4J246 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
TRAV8-4A0A0B4J246 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms