Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 BID-214ENST00000617586 542 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 AL354751.1-201ENST00000412768 1863 ntBASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 AC104417.2-201ENST00000562989 1793 ntBASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-1A0A0A6YYK1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 GPX1P1-201ENST00000388829 606 ntBASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 OR10C1-204ENST00000622521 1039 ntBASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 AC007322.1-201ENST00000426983 750 ntBASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 LSM12P1-201ENST00000411836 588 ntBASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 AC087623.3-201ENST00000607047 1098 ntBASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms