Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 TSPY23P-201ENST00000440136 739 ntBASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 PRELID1P1-202ENST00000567272 903 ntBASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC187A0A096LP49 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 AL512408.1-201ENST00000569378 2000 ntBASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 AC073314.1-201ENST00000568729 2216 ntBASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 AC092597.1-201ENST00000487352 616 ntBASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 AC092329.2-201ENST00000598402 547 ntBASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC187A0A096LP49 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 TSSC2-201ENST00000450217 709 ntBASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 BX276092.5-203ENST00000456199 560 ntBASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 AL121672.3-201ENST00000608644 468 ntBASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 ZNF815P-204ENST00000434898 1737 ntBASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC187A0A096LP49 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC187A0A096LP49 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms