Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 AP000997.3-201ENST00000623333 2250 ntBASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 AL589743.5-201ENST00000616611 1050 ntBASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 AC068338.2-201ENST00000563278 1430 ntBASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV18A0A075B6X5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 AC104417.2-201ENST00000562989 1793 ntBASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV18A0A075B6X5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV18A0A075B6X5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV18A0A075B6X5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV18A0A075B6X5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV18A0A075B6X5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.39■□□□□ 0.22
TRAV18A0A075B6X5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms