Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CD63-206ENST00000548160 648 ntTSL 2 BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 AC126615.2-201ENST00000553003 515 ntBASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 AC090287.1-201ENST00000578374 291 ntBASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 AC093826.2-201ENST00000579042 108 ntBASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 MIR4433B-201ENST00000581329 102 ntBASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 AC093278.2-201ENST00000564956 2485 ntBASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 TNPO1P3-201ENST00000436471 2662 ntBASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 GDA-209ENST00000545168 5362 ntTSL 2 BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC3.9□□□□□ -1.79
KRTAP3-3Q9BYR6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 AC239868.2-201ENST00000564237 4527 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 AC245060.5-201ENST00000610778 3293 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 GPI-202ENST00000415930 4000 ntTSL 2 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 AC009948.5-201ENST00000624360 4406 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 AC110716.2-201ENST00000563865 3945 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 RNA5SP192-201ENST00000364404 120 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 SNORA7.2-201ENST00000364446 145 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 Y_RNA.283-201ENST00000364798 112 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 Y_RNA.354-201ENST00000365448 111 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 COX17P1-201ENST00000378775 192 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 SNORA8-201ENST00000384574 139 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 PLA2G12AP2-201ENST00000424744 264 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 RNU6-542P-201ENST00000516405 103 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 RNU6-850P-201ENST00000516934 103 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 AC055716.1-201ENST00000550077 495 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 AC133485.1-201ENST00000567176 124 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 AC040162.2-201ENST00000573092 157 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 MIR3609-201ENST00000582661 80 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 SRP68P1-201ENST00000584247 269 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 pRNA.12-201ENST00000614353 90 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 pRNA.3-201ENST00000615048 90 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 AC103564.3-201ENST00000621194 220 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 MIR1248-201ENST00000629190 106 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 MIR338-201ENST00000636369 67 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 BRAFP1-201ENST00000445336 2703 ntBASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KRTAP3-3Q9BYR6 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 SMARCA2-263ENST00000637806 7061 ntTSL 5 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 AC004817.4-201ENST00000602396 3625 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms