RNA–Protein interactions for RNA: ENST00000517146.1

RNU4ATAC9P-201, Transcript of RNA, U4atac small nuclear 9, pseudogene, humanhuman

BASIC

Gene RNU4ATAC9P, Length 126 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC9P-201ENST00000517146 AEBP2Q6ZN18 517 aaPredicted RBP8.59□□□□□ -1.03
RNU4ATAC9P-201ENST00000517146 CHIC1Q5VXU3 224 aa8.2□□□□□ -1.1
RNU4ATAC9P-201ENST00000517146 SENP3Q9H4L4 574 aaPredicted RBP7.53□□□□□ -1.2
RNU4ATAC9P-201ENST00000517146 PHF23Q9BUL5 403 aaPredicted RBP7.31□□□□□ -1.24
RNU4ATAC9P-201ENST00000517146 POTEDQ86YR6 584 aa7.13□□□□□ -1.27
RNU4ATAC9P-201ENST00000517146 FOXD1Q16676 465 aa6.97□□□□□ -1.29
RNU4ATAC9P-201ENST00000517146 MSH5O43196 834 aa6.78□□□□□ -1.32
RNU4ATAC9P-201ENST00000517146 PIAS4Q8N2W9 510 aaPredicted RBP6.51□□□□□ -1.37
RNU4ATAC9P-201ENST00000517146 PLPPR3Q6T4P5 718 aa6.21□□□□□ -1.42
RNU4ATAC9P-201ENST00000517146 ADRA2BP18089 450 aa6.19□□□□□ -1.42
RNU4ATAC9P-201ENST00000517146 PPP6R1Q9UPN7 881 aa6.17□□□□□ -1.42
RNU4ATAC9P-201ENST00000517146 CACNB1Q02641 598 aaPredicted RBP6.03□□□□□ -1.44
RNU4ATAC9P-201ENST00000517146 DMRT2Q9Y5R5 561 aa5.87□□□□□ -1.47
RNU4ATAC9P-201ENST00000517146 SCAF1Q9H7N4 1312 aaKnown RBP5.82□□□□□ -1.48
RNU4ATAC9P-201ENST00000517146 MAPK8IP2Q13387 824 aaPredicted RBP5.76□□□□□ -1.49
RNU4ATAC9P-201ENST00000517146 DCAF8L1A6NGE4 600 aa5.75□□□□□ -1.49
RNU4ATAC9P-201ENST00000517146 RNF39Q9H2S5 420 aa5.67□□□□□ -1.5
RNU4ATAC9P-201ENST00000517146 C1QBPQ07021 282 aaKnown RBP5.62□□□□□ -1.51
RNU4ATAC9P-201ENST00000517146 POTEHQ6S545 545 aa5.55□□□□□ -1.52
RNU4ATAC9P-201ENST00000517146 HOXD11P31277 338 aaPredicted RBP5.49□□□□□ -1.53
RNU4ATAC9P-201ENST00000517146 DNAJC5BQ9UF47 199 aa5.4□□□□□ -1.54
RNU4ATAC9P-201ENST00000517146 RNF216Q9NWF9 866 aaPredicted RBP5.39□□□□□ -1.55
RNU4ATAC9P-201ENST00000517146 CNKSR2Q8WXI2 1034 aa5.36□□□□□ -1.55
RNU4ATAC9P-201ENST00000517146 PPP4R3CPQ6ZMV5 832 aa5.35□□□□□ -1.55
RNU4ATAC9P-201ENST00000517146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.33□□□□□ -1.56
RNU4ATAC9P-201ENST00000517146 CAPN15O75808 1086 aa5.22□□□□□ -1.57
RNU4ATAC9P-201ENST00000517146 DSG3P32926 999 aa5.18□□□□□ -1.58
RNU4ATAC9P-201ENST00000517146 NCBP3Q53F19 620 aaKnown RBP5.14□□□□□ -1.59
RNU4ATAC9P-201ENST00000517146 SPINK5Q9NQ38 1064 aaPredicted RBP5.11□□□□□ -1.59
RNU4ATAC9P-201ENST00000517146 APLP2Q06481 763 aa5.1□□□□□ -1.59
RNU4ATAC9P-201ENST00000517146 RBM42Q9BTD8 480 aaKnown RBP5.08□□□□□ -1.6
RNU4ATAC9P-201ENST00000517146 U3KPZ7 1027 aaPredicted RBP5.08□□□□□ -1.6
RNU4ATAC9P-201ENST00000517146 SP7Q8TDD2 431 aaPredicted RBP5.05□□□□□ -1.6
RNU4ATAC9P-201ENST00000517146 ZNF219Q9P2Y4 722 aaPredicted RBP5.05□□□□□ -1.6
RNU4ATAC9P-201ENST00000517146 CHRDL2Q6WN34 429 aa5.04□□□□□ -1.6
RNU4ATAC9P-201ENST00000517146 TRHP20396 242 aaPredicted RBP5.03□□□□□ -1.6
RNU4ATAC9P-201ENST00000517146 ABCB7O75027 752 aa5.02□□□□□ -1.61
RNU4ATAC9P-201ENST00000517146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.96□□□□□ -1.62
RNU4ATAC9P-201ENST00000517146 HNRNPUL2Q1KMD3 747 aaKnown RBP4.96□□□□□ -1.62
RNU4ATAC9P-201ENST00000517146 NPM3O75607 178 aaKnown RBP4.94□□□□□ -1.62
RNU4ATAC9P-201ENST00000517146 HAX1O00165 279 aa4.88□□□□□ -1.63
RNU4ATAC9P-201ENST00000517146 SAMD1Q6SPF0 538 aaPredicted RBP4.88□□□□□ -1.63
RNU4ATAC9P-201ENST00000517146 AKT1S1Q96B36 256 aa4.82□□□□□ -1.64
RNU4ATAC9P-201ENST00000517146 PIP4P2Q8N4L2 257 aa4.81□□□□□ -1.64
RNU4ATAC9P-201ENST00000517146 PLSCR2Q9NRY7 297 aa4.8□□□□□ -1.64
RNU4ATAC9P-201ENST00000517146 POLA2Q14181 598 aa4.78□□□□□ -1.64
RNU4ATAC9P-201ENST00000517146 SLC4A2P04920 1241 aa4.76□□□□□ -1.65
RNU4ATAC9P-201ENST00000517146 ZBTB12Q9Y330 459 aaPredicted RBP4.76□□□□□ -1.65
RNU4ATAC9P-201ENST00000517146 REM2Q8IYK8 340 aaPredicted RBP4.75□□□□□ -1.65
RNU4ATAC9P-201ENST00000517146 LHX8Q68G74 356 aa4.73□□□□□ -1.65
RNU4ATAC9P-201ENST00000517146 FXR2P51116 673 aaKnown RBP eCLIP4.71□□□□□ -1.66
RNU4ATAC9P-201ENST00000517146 PITPNM1O00562 1244 aa4.7□□□□□ -1.66
RNU4ATAC9P-201ENST00000517146 MYCNP04198 464 aaPredicted RBP4.65□□□□□ -1.67
RNU4ATAC9P-201ENST00000517146 OSCARQ8IYS5 282 aa4.65□□□□□ -1.67
RNU4ATAC9P-201ENST00000517146 EVX2Q03828 476 aa4.64□□□□□ -1.67
RNU4ATAC9P-201ENST00000517146 GABBR2O75899 941 aa4.6□□□□□ -1.67
RNU4ATAC9P-201ENST00000517146 PRKAR2AP13861 404 aaKnown RBP4.6□□□□□ -1.67
RNU4ATAC9P-201ENST00000517146 C19orf67A6NJJ6 358 aa4.58□□□□□ -1.68
RNU4ATAC9P-201ENST00000517146 CLEC11AQ9Y240 323 aa4.56□□□□□ -1.68
RNU4ATAC9P-201ENST00000517146 SPDYE1Q8NFV5 336 aaPredicted RBP4.55□□□□□ -1.68
RNU4ATAC9P-201ENST00000517146 SPDYE2BA6NHP3 402 aa4.52□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 SPDYE6P0CI01 402 aa4.52□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 SPDYE2Q495Y8 402 aa4.52□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 KCNA4P22459 653 aa4.51□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 CLCN6P51797 869 aa4.5□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 DCBLD2Q96PD2 775 aa4.5□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 POTEMA6NI47 508 aa4.48□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 FBLN2P98095 1184 aa4.48□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 PCDH10Q9P2E7 1040 aa4.47□□□□□ -1.69
RNU4ATAC9P-201ENST00000517146 CD44P16070 742 aaKnown RBP4.46□□□□□ -1.7
RNU4ATAC9P-201ENST00000517146 POTEGQ6S5H5 508 aa4.46□□□□□ -1.7
RNU4ATAC9P-201ENST00000517146 CHADLQ6NUI6 762 aa4.44□□□□□ -1.7
RNU4ATAC9P-201ENST00000517146 ATF5Q9Y2D1 282 aaPredicted RBP4.44□□□□□ -1.7
RNU4ATAC9P-201ENST00000517146 PRR29P0C7W0 189 aa4.43□□□□□ -1.7
RNU4ATAC9P-201ENST00000517146 POTEIP0CG38 1075 aa4.43□□□□□ -1.7
RNU4ATAC9P-201ENST00000517146 ZNF692Q9BU19 519 aaPredicted RBP4.41□□□□□ -1.7
RNU4ATAC9P-201ENST00000517146 FOXD4L1Q9NU39 408 aa4.39□□□□□ -1.71
RNU4ATAC9P-201ENST00000517146 OTUD5Q96G74 571 aa4.37□□□□□ -1.71
RNU4ATAC9P-201ENST00000517146 SSUH2Q9Y2M2 353 aa4.36□□□□□ -1.71
RNU4ATAC9P-201ENST00000517146 FARP1Q9Y4F1 1045 aaPredicted RBP4.36□□□□□ -1.71
RNU4ATAC9P-201ENST00000517146 ZNF579Q8NAF0 562 aaKnown RBP4.35□□□□□ -1.71
RNU4ATAC9P-201ENST00000517146 MAMSTRQ6ZN01 415 aa4.34□□□□□ -1.71
RNU4ATAC9P-201ENST00000517146 ZRANB1Q9UGI0 708 aa4.34□□□□□ -1.71
RNU4ATAC9P-201ENST00000517146 PAK3O75914 559 aaPredicted RBP4.32□□□□□ -1.72
RNU4ATAC9P-201ENST00000517146 PABPN1Q86U42 306 aaKnown RBP eCLIP4.31□□□□□ -1.72
RNU4ATAC9P-201ENST00000517146 ATXN8OSP0DMR3 200 aa4.3□□□□□ -1.72
RNU4ATAC9P-201ENST00000517146 SCUBE2Q9NQ36 999 aa4.29□□□□□ -1.72
RNU4ATAC9P-201ENST00000517146 GALR2O43603 387 aaPredicted RBP4.28□□□□□ -1.72
RNU4ATAC9P-201ENST00000517146 FAM163AQ96GL9 167 aaPredicted RBP4.28□□□□□ -1.72
RNU4ATAC9P-201ENST00000517146 POTEB2H3BUK9 544 aa4.27□□□□□ -1.73
RNU4ATAC9P-201ENST00000517146 SLC4A1APQ9BWU0 796 aaKnown RBP4.26□□□□□ -1.73
RNU4ATAC9P-201ENST00000517146 METRNQ9UJH8 293 aa4.26□□□□□ -1.73
RNU4ATAC9P-201ENST00000517146 SLC39A7Q92504 469 aa4.25□□□□□ -1.73
RNU4ATAC9P-201ENST00000517146 C7P10643 843 aa4.24□□□□□ -1.73
RNU4ATAC9P-201ENST00000517146 MKRN4PQ13434 485 aaPredicted RBP4.23□□□□□ -1.73
RNU4ATAC9P-201ENST00000517146 CDAN1Q8IWY9 1227 aa4.22□□□□□ -1.73
RNU4ATAC9P-201ENST00000517146 PHF12Q96QT6 1004 aa4.21□□□□□ -1.74
RNU4ATAC9P-201ENST00000517146 NPM1P06748 294 aaKnown RBP eCLIP4.19□□□□□ -1.74
RNU4ATAC9P-201ENST00000517146 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
RNU4ATAC9P-201ENST00000517146 ASTLQ6HA08 431 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms