Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 SPATA31C1-201ENST00000420021 3895 ntBASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 CLEC4M-201ENST00000248228 1865 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 AL359955.1-201ENST00000455242 3275 ntBASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 DNAH10-209ENST00000614082 3484 ntTSL 5 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 AC091152.4-201ENST00000623480 3483 ntBASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 AC009053.1-202ENST00000563377 2051 ntBASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 ADGRF4-202ENST00000327753 3074 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 LACTB2-AS1-201ENST00000499227 3716 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 AC026124.1-201ENST00000545709 3457 ntTSL 5 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 U3.1-201ENST00000362500 215 ntBASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU5A-1-201ENST00000362698 116 ntBASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 RNA5SP448-201ENST00000363151 111 ntBASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU6-1141P-201ENST00000364520 107 ntBASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU6-1051P-201ENST00000365471 102 ntBASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 S100A8-202ENST00000368733 523 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 SNORA72.6-201ENST00000384520 129 ntBASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 MIR181C-201ENST00000384881 110 ntBASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 MIR654-201ENST00000385199 81 ntBASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 SNORA40B-201ENST00000385573 128 ntBASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 MSRB1P1-201ENST00000396851 354 ntBASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 MIR548O-201ENST00000408583 114 ntBASIC1.47□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SKP220-201ENST00000410611 288 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms