RNA–Protein interactions for RNA: ENST00000538974.5

RAPGEF4-214, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 2 BASIC

Gene RAPGEF4, Length 3,920 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-214ENST00000538974 NISCHQ9Y2I1 1504 aa13.19□□□□□ -0.3
RAPGEF4-214ENST00000538974 DCAF8L2P0C7V8 631 aa12.55□□□□□ -0.4
RAPGEF4-214ENST00000538974 SHROOM4Q9ULL8 1493 aa12.35□□□□□ -0.43
RAPGEF4-214ENST00000538974 SUPT5HO00267 1087 aaKnown RBP12.28□□□□□ -0.44
RAPGEF4-214ENST00000538974 EHMT2Q96KQ7 1210 aa11.77□□□□□ -0.53
RAPGEF4-214ENST00000538974 FAM9AQ8IZU1 332 aaPredicted RBP11.52□□□□□ -0.56
RAPGEF4-214ENST00000538974 PCGF6Q9BYE7 350 aa11.49□□□□□ -0.57
RAPGEF4-214ENST00000538974 TTBK1Q5TCY1 1321 aaPredicted RBP11.33□□□□□ -0.6
RAPGEF4-214ENST00000538974 CHIC1Q5VXU3 224 aa11.32□□□□□ -0.6
RAPGEF4-214ENST00000538974 LOC105371045A0A1W2PR82 267 aa11.31□□□□□ -0.6
RAPGEF4-214ENST00000538974 TRIM41Q8WV44 630 aa11.24□□□□□ -0.61
RAPGEF4-214ENST00000538974 PPARGC1BQ86YN6 1023 aaKnown RBP11.22□□□□□ -0.61
RAPGEF4-214ENST00000538974 RANGAP1P46060 587 aaPredicted RBP11.11□□□□□ -0.63
RAPGEF4-214ENST00000538974 HRCP23327 699 aa11.04□□□□□ -0.64
RAPGEF4-214ENST00000538974 ABCC9O60706 1549 aa11.03□□□□□ -0.64
RAPGEF4-214ENST00000538974 ZCCHC6Q5VYS8 1495 aaKnown RBP11.02□□□□□ -0.65
RAPGEF4-214ENST00000538974 UBTFP17480 764 aaKnown RBP10.93□□□□□ -0.66
RAPGEF4-214ENST00000538974 TRIM26Q12899 539 aaPredicted RBP10.93□□□□□ -0.66
RAPGEF4-214ENST00000538974 MYO15BQ96JP2 1530 aa10.92□□□□□ -0.66
RAPGEF4-214ENST00000538974 CCER1Q8TC90 406 aaPredicted RBP10.91□□□□□ -0.66
RAPGEF4-214ENST00000538974 PABPN1Q86U42 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
RAPGEF4-214ENST00000538974 APLP2Q06481 763 aa10.84□□□□□ -0.67
RAPGEF4-214ENST00000538974 SCRIBQ14160 1630 aa10.81□□□□□ -0.68
RAPGEF4-214ENST00000538974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.79□□□□□ -0.68
RAPGEF4-214ENST00000538974 CCDC180Q9P1Z9 1646 aa10.78□□□□□ -0.68
RAPGEF4-214ENST00000538974 ZEB1P37275 1124 aaPredicted RBP10.74□□□□□ -0.69
RAPGEF4-214ENST00000538974 ATP1B4Q9UN42 357 aaPredicted RBP10.71□□□□□ -0.69
RAPGEF4-214ENST00000538974 YTHDC1Q96MU7 727 aaKnown RBP10.7□□□□□ -0.7
RAPGEF4-214ENST00000538974 HNRNPUL2Q1KMD3 747 aaKnown RBP10.7□□□□□ -0.7
RAPGEF4-214ENST00000538974 ITGAEP38570 1179 aa10.64□□□□□ -0.71
RAPGEF4-214ENST00000538974 RSF1Q96T23 1441 aaPredicted RBP10.61□□□□□ -0.71
RAPGEF4-214ENST00000538974 CECR2Q9BXF3 1484 aa10.53□□□□□ -0.72
RAPGEF4-214ENST00000538974 DCAF1Q9Y4B6 1507 aa10.52□□□□□ -0.73
RAPGEF4-214ENST00000538974 CENPBP07199 599 aaPredicted RBP10.51□□□□□ -0.73
RAPGEF4-214ENST00000538974 CSRNP3Q8WYN3 585 aa10.47□□□□□ -0.73
RAPGEF4-214ENST00000538974 DIEXFQ68CQ4 756 aaKnown RBP10.47□□□□□ -0.73
RAPGEF4-214ENST00000538974 RB1CC1Q8TDY2 1594 aa10.44□□□□□ -0.74
RAPGEF4-214ENST00000538974 MROH2BQ7Z745 1585 aa10.37□□□□□ -0.75
RAPGEF4-214ENST00000538974 P3H3Q8IVL6 736 aa10.37□□□□□ -0.75
RAPGEF4-214ENST00000538974 FAM50AQ14320 339 aaKnown RBP10.32□□□□□ -0.76
RAPGEF4-214ENST00000538974 GTF3C3Q9Y5Q9 886 aa10.31□□□□□ -0.76
RAPGEF4-214ENST00000538974 CNGB1Q14028 1251 aaPredicted RBP10.31□□□□□ -0.76
RAPGEF4-214ENST00000538974 NEUROD1Q13562 356 aa10.28□□□□□ -0.76
RAPGEF4-214ENST00000538974 NACADO15069 1562 aa10.28□□□□□ -0.76
RAPGEF4-214ENST00000538974 SOGA1O94964 1423 aa10.27□□□□□ -0.76
RAPGEF4-214ENST00000538974 ABCC8Q09428 1581 aa10.27□□□□□ -0.76
RAPGEF4-214ENST00000538974 ARID3CA6NKF2 412 aa10.27□□□□□ -0.77
RAPGEF4-214ENST00000538974 CEP162Q5TB80 1403 aa10.26□□□□□ -0.77
RAPGEF4-214ENST00000538974 WIZO95785 1651 aa10.26□□□□□ -0.77
RAPGEF4-214ENST00000538974 ZNF316A6NFI3 1004 aaPredicted RBP10.25□□□□□ -0.77
RAPGEF4-214ENST00000538974 CCDC88BA6NC98 1476 aa10.23□□□□□ -0.77
RAPGEF4-214ENST00000538974 SCAF1Q9H7N4 1312 aaKnown RBP10.22□□□□□ -0.77
RAPGEF4-214ENST00000538974 PELP1Q8IZL8 1130 aaKnown RBP10.22□□□□□ -0.77
RAPGEF4-214ENST00000538974 ACIN1Q9UKV3 1341 aaKnown RBP10.21□□□□□ -0.78
RAPGEF4-214ENST00000538974 POLR3GLQ9BT43 218 aa10.19□□□□□ -0.78
RAPGEF4-214ENST00000538974 BAZ1AQ9NRL2 1556 aaPredicted RBP10.18□□□□□ -0.78
RAPGEF4-214ENST00000538974 WRNQ14191 1432 aaPredicted RBP eCLIP10.18□□□□□ -0.78
RAPGEF4-214ENST00000538974 CLIP1P30622 1438 aa10.18□□□□□ -0.78
RAPGEF4-214ENST00000538974 BCANQ96GW7 911 aa10.15□□□□□ -0.78
RAPGEF4-214ENST00000538974 RUSC2Q8N2Y8 1516 aa10.14□□□□□ -0.79
RAPGEF4-214ENST00000538974 MIER1Q8N108 512 aa10.14□□□□□ -0.79
RAPGEF4-214ENST00000538974 HIRIP3Q9BW71 556 aaPredicted RBP10.13□□□□□ -0.79
RAPGEF4-214ENST00000538974 TNIKQ9UKE5 1360 aa10.11□□□□□ -0.79
RAPGEF4-214ENST00000538974 GOLGA3Q08378 1498 aa10.11□□□□□ -0.79
RAPGEF4-214ENST00000538974 BAZ1BQ9UIG0 1483 aaKnown RBP10.11□□□□□ -0.79
RAPGEF4-214ENST00000538974 TRIM52Q96A61 297 aa10.11□□□□□ -0.79
RAPGEF4-214ENST00000538974 NEFLP07196 543 aa10.1□□□□□ -0.79
RAPGEF4-214ENST00000538974 FBLN2P98095 1184 aa10.08□□□□□ -0.8
RAPGEF4-214ENST00000538974 ZNF326Q5BKZ1 582 aaKnown RBP10.04□□□□□ -0.8
RAPGEF4-214ENST00000538974 DDX10Q13206 875 aaKnown RBP10.03□□□□□ -0.8
RAPGEF4-214ENST00000538974 KANK4Q5T7N3 995 aaPredicted RBP10.03□□□□□ -0.8
RAPGEF4-214ENST00000538974 CHIC2Q9UKJ5 165 aa10.03□□□□□ -0.8
RAPGEF4-214ENST00000538974 EEA1Q15075 1411 aa10.02□□□□□ -0.81
RAPGEF4-214ENST00000538974 CEP164Q9UPV0 1460 aa10.02□□□□□ -0.81
RAPGEF4-214ENST00000538974 TOP2AP11388 1531 aaKnown RBP10□□□□□ -0.81
RAPGEF4-214ENST00000538974 SMARCA4P51532 1647 aa9.98□□□□□ -0.81
RAPGEF4-214ENST00000538974 ZNF777Q9ULD5 760 aaPredicted RBP9.97□□□□□ -0.81
RAPGEF4-214ENST00000538974 SIN3AQ96ST3 1273 aa9.96□□□□□ -0.81
RAPGEF4-214ENST00000538974 RAPGEF2Q9Y4G8 1499 aa9.96□□□□□ -0.82
RAPGEF4-214ENST00000538974 MYT1LQ9UL68 1186 aa9.95□□□□□ -0.82
RAPGEF4-214ENST00000538974 ANP32CO43423 234 aa9.94□□□□□ -0.82
RAPGEF4-214ENST00000538974 ERICH6Q7L0X2 663 aa9.94□□□□□ -0.82
RAPGEF4-214ENST00000538974 KIF27Q86VH2 1401 aa9.93□□□□□ -0.82
RAPGEF4-214ENST00000538974 SMARCA2P51531 1590 aa9.93□□□□□ -0.82
RAPGEF4-214ENST00000538974 RRP7BPQ9NSQ0 103 aa9.92□□□□□ -0.82
RAPGEF4-214ENST00000538974 SENP3-EIF4A1A0A087X0R7 540 aa9.92□□□□□ -0.82
RAPGEF4-214ENST00000538974 VPS8Q8N3P4 1428 aa9.92□□□□□ -0.82
RAPGEF4-214ENST00000538974 ATAD2BQ9ULI0 1458 aa9.91□□□□□ -0.82
RAPGEF4-214ENST00000538974 CUX2O14529 1486 aa9.9□□□□□ -0.82
RAPGEF4-214ENST00000538974 MTUS2Q5JR59 1369 aa9.89□□□□□ -0.83
RAPGEF4-214ENST00000538974 TONSLQ96HA7 1378 aa9.89□□□□□ -0.83
RAPGEF4-214ENST00000538974 FKBP8Q14318 412 aa9.88□□□□□ -0.83
RAPGEF4-214ENST00000538974 IRX6P78412 446 aaPredicted RBP9.85□□□□□ -0.83
RAPGEF4-214ENST00000538974 CARMIL1Q5VZK9 1371 aa9.85□□□□□ -0.83
RAPGEF4-214ENST00000538974 CCNB3Q8WWL7 1395 aa9.85□□□□□ -0.83
RAPGEF4-214ENST00000538974 HNRNPUQ00839 825 aaKnown RBP eCLIP9.83□□□□□ -0.84
RAPGEF4-214ENST00000538974 FAM9BQ8IZU0 186 aa9.82□□□□□ -0.84
RAPGEF4-214ENST00000538974 TDRD9Q8NDG6 1382 aaKnown RBP9.8□□□□□ -0.84
RAPGEF4-214ENST00000538974 KCNH8Q96L42 1107 aa9.8□□□□□ -0.84
RAPGEF4-214ENST00000538974 SYNJ1O43426 1573 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms