Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 ERG-210ENST00000442448 5034 ntTSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 STAG3-202ENST00000394018 4163 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 APP-209ENST00000440126 2846 ntTSL 2 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 SEPT6-203ENST00000354416 4652 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 HERC2P5-201ENST00000562687 3825 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 DEPDC5-206ENST00000400249 5458 ntTSL 5 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 AL591848.4-201ENST00000567832 3472 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 TCF20-202ENST00000359486 7410 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 RNA5SP145-201ENST00000363124 125 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 RNU6-940P-201ENST00000363433 104 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 SNORA70.2-201ENST00000364506 135 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 RNU6-1187P-201ENST00000364771 110 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 RN7SKP136-201ENST00000410927 300 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 SNRPGP11-201ENST00000411777 232 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 AL117378.1-202ENST00000421310 601 ntTSL 5 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 RPL7AP28-201ENST00000464513 571 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 RN7SL745P-201ENST00000484900 299 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 RNU6-991P-201ENST00000516168 107 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 IGKV1OR22-1-201ENST00000521497 360 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 IGKV2OR22-4-201ENST00000523309 367 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 HMGN2P6-201ENST00000551091 273 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 uc_338.14-201ENST00000613162 166 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 uc_338.23-201ENST00000614169 164 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 AC106800.4-201ENST00000614905 153 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 ANKMY2-205ENST00000627859 210 ntTSL 5 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 MIR3191-201ENST00000636300 76 ntBASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC3.98□□□□□ -1.77
KRTAP3-3Q9BYR6 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 SMG1P5-202ENST00000529428 4219 ntBASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 LINC01963-201ENST00000562038 3148 ntBASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 ZFRP1-201ENST00000457579 2970 ntBASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 SNORD113-4-201ENST00000364802 75 ntBASIC3.97□□□□□ -1.77
KRTAP3-3Q9BYR6 MIR25-201ENST00000384816 84 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms